fgenesh1_pg.C_scaffold_7000295 (Sporobolomyces roseus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 fgenesh1_pg.C_scaffold_7000295 T227475_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_7000295 Homeodomain 5 38

Links

Other Homeodomain family TFs
Other Sporobolomyces roseus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA017891 Oryza indica BGIOSGA017891 N
OBART05G19660 Oryza barthii OBART05G19660 N
OGLUM05G20720 Oryza glumaepatula OGLUM05G20720 N
OMERI05G17210 Oryza meridionalis OMERI05G17210 N
ONIVA05G20590 Oryza nivara ONIVA05G20590 N
OPUNC05G17330 Oryza punctata OPUNC05G17330 N
ORGLA05G0171000 Oryza glaberrima ORGLA05G0171000 N
ORUFI05G20870 Oryza rufipogon ORUFI05G20870 N