CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_051_00028
(
Aquilegia coerulea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Aquca_051_00028
T228063_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.712
0.754
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_051_00028.1
Homeodomain
36
92
KPKRKMKSAAQLEVLEKTYLLETYPSEALRAELSVKLGLTDRQLQMWFCHRRLKDRK
Links
Other
Homeodomain
family TFs
Other
Aquilegia coerulea
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB42
Homo sapiens
ENSG00000179627
D
0.000
zbtb42
Oryzias latipes
ENSORLG00000017008
I
0.000
znf238.2
Xenopus tropicalis
XB-GENE-1219066
I
0.000
Ogr11588
Ophisaurus gracilis
Ogr11588
I
0.000
ENSP00000409107
Macaca fascicularis
ENSP00000409107
I
0.000
Alligator_sinensis_CCG020881.1
Alligator sinensis
Alligator_sinensis_CCG020881.1
I
0.000
ENSXMAG00000006703
Xiphophorus maculatus
ENSXMAG00000006703
I
0.000
zbtb42
Takifugu rubripes
ENSTRUG00000013592
I
0.000
zbtb42
Tetraodon nigroviridis
ENSTNIG00000000917
I
0.000
ENSSHAG00000008534
Sarcophilus harrisii
ENSSHAG00000008534
I
0.000
ZBTB42
Pan troglodytes
ENSPTRG00000040287
I
0.000
ENSPFOG00000010298
Poecilia formosa
ENSPFOG00000010298
I
0.000
ZBTB42
Anolis carolinensis
ENSACAG00000011451
I
0.000
ENSONIG00000012149
Oreochromis niloticus
ENSONIG00000012149
I
0.000
ZBTB42
Monodelphis domestica
ENSMODG00000013701
I
0.000
ZBTB42
Meleagris gallopavo
ENSMGAG00000015389
I
0.000
ENSLOCG00000012759
Lepisosteus oculatus
ENSLOCG00000012759
I
0.000
ZBTB42
Gallus gallus
ENSGALG00000023025
I
0.000
zbtb42
Gasterosteus aculeatus
ENSGACG00000006297
I
0.000
zbtb42
Danio rerio
ENSDARG00000102761
I
0.000
ENSCSAG00000019588
Chlorocebus sabaeus
ENSCSAG00000019588
I
0.000
ENSAMEG00000007755
Ailuropoda melanoleuca
ENSAMEG00000007755
I
0.000