evm.TU.supercontig_27.2 (Carica papaya)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 evm.TU.supercontig_27.2 T228548_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.855 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_27.2 Homeodomain 38 94

Links

Other Homeodomain family TFs
Other Carica papaya TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA12G01580 Oryza nivara ONIVA12G01580 N 0.000
OS12G0407000 Oryza sativa OS12G0407000 N 0.000
ORUFI12G10530 Oryza rufipogon ORUFI12G10530 N 0.000
ORUFI12G10490 Oryza rufipogon ORUFI12G10490 N 0.000
ORUFI06G14140 Oryza rufipogon ORUFI06G14140 N 0.000
ORGLA12G0089800 Oryza glaberrima ORGLA12G0089800 N 0.000
ORGLA12G0089600 Oryza glaberrima ORGLA12G0089600 N 0.000
OPUNC12G08600 Oryza punctata OPUNC12G08600 N 0.000
OPUNC06G14680 Oryza punctata OPUNC06G14680 N 0.000
ONIVA12G01620 Oryza nivara ONIVA12G01620 N 0.000
BGIOSGA006672 Oryza indica BGIOSGA006672 N 0.000
OLONG_018852 Oryza longistaminata OLONG_018852 N 0.000
OLONG_012664 Oryza longistaminata OLONG_012664 N 0.000
OGLUM12G10680 Oryza glumaepatula OGLUM12G10680 N 0.000
OGLUM12G10670 Oryza glumaepatula OGLUM12G10670 N 0.000
OGLUM06G17270 Oryza glumaepatula OGLUM06G17270 N 0.000
OBART12G09480 Oryza barthii OBART12G09480 N 0.000
OBART12G09450 Oryza barthii OBART12G09450 N 0.000
BGIOSGA018453 Oryza indica BGIOSGA018453 N 0.000