orange1.1g001425m.g (Citrus sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 orange1.1g001425m.g T229130_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g001425m Homeodomain 69 125

Links

Other Homeodomain family TFs
Other Citrus sinensis TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0002s20990 Populus trichocarpa POPTR_0002s20990 N 0.732
PDK_20s1602441g001 Phoenix dactylifera PDK_20s1602441g001 N 0.655
PK02496.1 Cannabis sativa PK02496.1 N 0.685
SapurV1A.0155s0080 Salix purpurea SapurV1A.0155s0080 N 0.732
Ciclev10018617m.g Citrus clementina Ciclev10018617m.g N 0.867
Aquca_017_00223 Aquilegia coerulea Aquca_017_00223 N 0.670
cassava29583.valid.m1 Manihot esculenta cassava29583.valid.m1 N 0.712
cassava29582.valid.m1 Manihot esculenta cassava29582.valid.m1 N 0.712
LD Vitis vinifera VIT_07s0104g01580 N 0.709
TRIUR3_34541 Triticum urartu TRIUR3_34541 N 0.725
Traes_3DL_D4FBDA9DC Triticum aestivum Traes_3DL_D4FBDA9DC N 0.725
Traes_3B_3142C10C9 Triticum aestivum Traes_3B_3142C10C9 N 0.725
TCM_004566 Theobroma cacao TCM_004566 N 0.796
Solyc09g074690.2 Solanum lycopersicum Solyc09g074690.2 N 0.750
POPTR_0014s12730 Populus trichocarpa POPTR_0014s12730 N 0.808
AMTR_s00057p00206030 Amborella trichopoda AMTR_s00057p00206030 N 0.702
OS01G0934300 Oryza sativa OS01G0934300 N 0.753
ORUFI01G46480 Oryza rufipogon ORUFI01G46480 N 0.753
ORGLA01G0367900 Oryza glaberrima ORGLA01G0367900 N 0.753
OPUNC01G42000 Oryza punctata OPUNC01G42000 N 0.753
ONIVA01G48990 Oryza nivara ONIVA01G48990 N 0.753
OLONG_017231 Oryza longistaminata OLONG_017231 N 0.753
OGLUM01G47350 Oryza glumaepatula OGLUM01G47350 N 0.753
OBART01G43050 Oryza barthii OBART01G43050 N 0.753
OB01G52060 Oryza brachyantha OB01G52060 N 0.722
LPERR01G37480 Leersia perrieri LPERR01G37480 N 0.753
GSMUA_Achr1G11230_001 Musa acuminata GSMUA_Achr1G11230_001 N 0.684
BRADI2G59937 Brachypodium distachyon BRADI2G59937 N 0.751
BGIOSGA005119 Oryza indica BGIOSGA005119 N 0.753