AMTR_s00016p00083040 (Amborella trichopoda)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01698 (FLO_LFY) IPR002910 AMTR_s00016p00083040 T244678_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.774 0.774
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.774 0.774
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN06132 Leafy 1 375

Links

Other Leafy family TFs
Other Amborella trichopoda TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5AL_373E730BB Triticum aestivum Traes_5AL_373E730BB I 0.000
Ca_08255 Cicer arietinum Ca_08255 I 0.000
Pavir.Ba02955 Panicum virgatum Pavir.Ba02955 I 0.000
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.000
GRMZM2G154182 Zea mays GRMZM2G154182 N 0.000
Sb03g008860 Sorghum bicolor Sb03g008860 N 0.000