CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10018275.g
(
Linum usitatissimum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Lus10018275.g
T247033_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.949
0.949
gw1.238.28.1
M02262_2.00
Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN
PBM
Weirauch et al.(2014)
pTH8459
0.848
0.848
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10018275
LOB
16
114
PCAACKLLRRRCAQDCVFSPYFPADQPHKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQA
Links
Other
LOB
family TFs
Other
Linum usitatissimum
TFs
296 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
BGIOSGA004705
Oryza indica
BGIOSGA004705
I
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
BGIOSGA017860
Oryza indica
BGIOSGA017860
I
BGIOSGA023706
Oryza indica
BGIOSGA023706
I
BGIOSGA030346
Oryza indica
BGIOSGA030346
I
BGIOSGA030535
Oryza indica
BGIOSGA030535
I
BGIOSGA034612
Oryza indica
BGIOSGA034612
I
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
BRADI2G53520
Brachypodium distachyon
BRADI2G53520
I
BRADI3G34850
Brachypodium distachyon
BRADI3G34850
I
BRADI4G28280
Brachypodium distachyon
BRADI4G28280
I
BRADI4G44350
Brachypodium distachyon
BRADI4G44350
I
BRADI4G44360
Brachypodium distachyon
BRADI4G44360
I
F775_00757
Aegilops tauschii
F775_00757
I
F775_03184
Aegilops tauschii
F775_03184
I
F775_07376
Aegilops tauschii
F775_07376
I
F775_07845
Aegilops tauschii
F775_07845
I
F775_15928
Aegilops tauschii
F775_15928
I
F775_21933
Aegilops tauschii
F775_21933
I
F775_22808
Aegilops tauschii
F775_22808
I
F775_25840
Aegilops tauschii
F775_25840
I
F775_27484
Aegilops tauschii
F775_27484
I
F775_30853
Aegilops tauschii
F775_30853
I
GRMZM2G004060
Zea mays
GRMZM2G004060
I
GRMZM2G025895
Zea mays
GRMZM2G025895
I
GRMZM2G029292
Zea mays
GRMZM2G029292
I
GRMZM2G059562
Zea mays
GRMZM2G059562
I
GRMZM2G061408
Zea mays
GRMZM2G061408
I
GRMZM2G163418
Zea mays
GRMZM2G163418
I
GRMZM2G324999
Zea mays
GRMZM2G324999
I
GRMZM2G382350
Zea mays
GRMZM2G382350
I
GSMUA_Achr5G08580_001
Musa acuminata
GSMUA_Achr5G08580_001
I
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
LPERR01G30500
Leersia perrieri
LPERR01G30500
I
LPERR05G06630
Leersia perrieri
LPERR05G06630
I
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
LPERR07G23280
Leersia perrieri
LPERR07G23280
I
LPERR09G04330
Leersia perrieri
LPERR09G04330
I
LPERR11G00960
Leersia perrieri
LPERR11G00960
I
MLOC_45055
Hordeum vulgare
MLOC_45055
I
MLOC_52504
Hordeum vulgare
MLOC_52504
I
MLOC_5971
Hordeum vulgare
MLOC_5971
I
MLOC_68061
Hordeum vulgare
MLOC_68061
I
MLOC_71897
Hordeum vulgare
MLOC_71897
I
OB01G44170
Oryza brachyantha
OB01G44170
I
OB03G26140
Oryza brachyantha
OB03G26140
I
OB05G17240
Oryza brachyantha
OB05G17240
I
OB05G27830
Oryza brachyantha
OB05G27830
I
OB07G31890
Oryza brachyantha
OB07G31890
I
OB09G14040
Oryza brachyantha
OB09G14040
I
OBART01G35380
Oryza barthii
OBART01G35380
I
OBART05G08130
Oryza barthii
OBART05G08130
I
OBART05G20340
Oryza barthii
OBART05G20340
I
OBART07G26430
Oryza barthii
OBART07G26430
I
OBART09G06020
Oryza barthii
OBART09G06020
I
OBART11G01110
Oryza barthii
OBART11G01110
I
OGLUM01G39390
Oryza glumaepatula
OGLUM01G39390
I
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
OGLUM05G21420
Oryza glumaepatula
OGLUM05G21420
I
OGLUM05G21470
Oryza glumaepatula
OGLUM05G21470
I
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
OGLUM07G26470
Oryza glumaepatula
OGLUM07G26470
I
OGLUM09G06630
Oryza glumaepatula
OGLUM09G06630
I
OGLUM11G00850
Oryza glumaepatula
OGLUM11G00850
I
OGLUM11G00870
Oryza glumaepatula
OGLUM11G00870
I
OLONG_000636
Oryza longistaminata
OLONG_000636
I
OLONG_008209
Oryza longistaminata
OLONG_008209
I
OLONG_019907
Oryza longistaminata
OLONG_019907
I
OLONG_027124
Oryza longistaminata
OLONG_027124
I
OMERI01G32510
Oryza meridionalis
OMERI01G32510
I
OMERI05G18170
Oryza meridionalis
OMERI05G18170
I
OMERI05G18250
Oryza meridionalis
OMERI05G18250
I
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
OMERI07G23060
Oryza meridionalis
OMERI07G23060
I
OMERI09G04750
Oryza meridionalis
OMERI09G04750
I
ONIVA01G40390
Oryza nivara
ONIVA01G40390
I
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
ONIVA05G21440
Oryza nivara
ONIVA05G21440
I
ONIVA05G21460
Oryza nivara
ONIVA05G21460
I
ONIVA07G26140
Oryza nivara
ONIVA07G26140
I
ONIVA09G05410
Oryza nivara
ONIVA09G05410
I
ONIVA11G01240
Oryza nivara
ONIVA11G01240
I
OPUNC01G34300
Oryza punctata
OPUNC01G34300
I
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
OPUNC05G18030
Oryza punctata
OPUNC05G18030
I
OPUNC07G24890
Oryza punctata
OPUNC07G24890
I
OPUNC09G05480
Oryza punctata
OPUNC09G05480
I
ORGLA01G0292200
Oryza glaberrima
ORGLA01G0292200
I
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
ORGLA05G0177200
Oryza glaberrima
ORGLA05G0177200
I
ORGLA07G0207800
Oryza glaberrima
ORGLA07G0207800
I
ORGLA11G0202000
Oryza glaberrima
ORGLA11G0202000
I
ORUFI01G38690
Oryza rufipogon
ORUFI01G38690
I
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
ORUFI05G21560
Oryza rufipogon
ORUFI05G21560
I
ORUFI05G21600
Oryza rufipogon
ORUFI05G21600
I
ORUFI07G27440
Oryza rufipogon
ORUFI07G27440
I
ORUFI09G06720
Oryza rufipogon
ORUFI09G06720
I
OS01G0821600
Oryza sativa
OS01G0821600
I
OS05G0478400
Oryza sativa
OS05G0478400
I
OS05G0478800
Oryza sativa
OS05G0478800
I
OS07G0680400
Oryza sativa
OS07G0680400
I
OS09G0334500
Oryza sativa
OS09G0334500
I
PRUPE_ppa008573mg
Prunus persica
PRUPE_ppa008573mg
I
Sb02g022280
Sorghum bicolor
Sb02g022280
I
Sb02g022290
Sorghum bicolor
Sb02g022290
I
Sb02g043030
Sorghum bicolor
Sb02g043030
I
Sb03g038170
Sorghum bicolor
Sb03g038170
I
Sb03g038210
Sorghum bicolor
Sb03g038210
I
Sb07g019400
Sorghum bicolor
Sb07g019400
I
Sb08g005080
Sorghum bicolor
Sb08g005080
I
Si002401m.g
Setaria italica
Si002401m.g
I
Si015433m.g
Setaria italica
Si015433m.g
I
Si025181m.g
Setaria italica
Si025181m.g
I
Si027574m.g
Setaria italica
Si027574m.g
I
Si028202m.g
Setaria italica
Si028202m.g
I
Si030395m.g
Setaria italica
Si030395m.g
I
TCM_006103
Theobroma cacao
TCM_006103
I
TCM_019689
Theobroma cacao
TCM_019689
I
Traes_2AS_6269D889E
Triticum aestivum
Traes_2AS_6269D889E
I
Traes_2BS_B65714572
Triticum aestivum
Traes_2BS_B65714572
I
TRAES3BF001300030CFD_g
Triticum aestivum
TRAES3BF001300030CFD_g
I
TRAES3BF005100010CFD_g
Triticum aestivum
TRAES3BF005100010CFD_g
I
Traes_4AS_0DA136E0E
Triticum aestivum
Traes_4AS_0DA136E0E
I
Traes_5BL_0A3D332A8
Triticum aestivum
Traes_5BL_0A3D332A8
I
Traes_5BL_F853EA802
Triticum aestivum
Traes_5BL_F853EA802
I
Traes_5DL_5C93510D5
Triticum aestivum
Traes_5DL_5C93510D5
I
Traes_5DL_C93641E43
Triticum aestivum
Traes_5DL_C93641E43
I
TRIUR3_05298
Triticum urartu
TRIUR3_05298
I
TRIUR3_06813
Triticum urartu
TRIUR3_06813
I
TRIUR3_14306
Triticum urartu
TRIUR3_14306
I
TRIUR3_17401
Triticum urartu
TRIUR3_17401
I
TRIUR3_22128
Triticum urartu
TRIUR3_22128
I
TRIUR3_30416
Triticum urartu
TRIUR3_30416
I
Cla018337
Citrullus lanatus
Cla018337
I
Pm024064
Prunus mume
Pm024064
I
Cucsa.177060
Cucumis sativus
Cucsa.177060
I
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
gene13554-v1.0-hybrid
Fragaria vesca
gene13554-v1.0-hybrid
I
gene32076-v1.0-hybrid
Fragaria vesca
gene32076-v1.0-hybrid
I
Gorai.004G134600
Gossypium raimondii
Gorai.004G134600
I
MDP0000146360
Malus domestica
MDP0000146360
I
MDP0000299114
Malus domestica
MDP0000299114
I
MDP0000315045
Malus domestica
MDP0000315045
I
MDP0000754989
Malus domestica
MDP0000754989
I
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
Pavir.Ba00227
Panicum virgatum
Pavir.Ba00227
I
Pavir.Ba02545
Panicum virgatum
Pavir.Ba02545
I
Pavir.Bb02088
Panicum virgatum
Pavir.Bb02088
I
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
Pavir.Ea03258
Panicum virgatum
Pavir.Ea03258
I
Pavir.Eb03563
Panicum virgatum
Pavir.Eb03563
I
Pavir.Fa01520
Panicum virgatum
Pavir.Fa01520
I
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
Pavir.J35902
Panicum virgatum
Pavir.J35902
I
Pavir.J37854
Panicum virgatum
Pavir.J37854
I
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
PDK_20s1314561g002
Phoenix dactylifera
PDK_20s1314561g002
I
BGIOSGA000583
Oryza indica
BGIOSGA000583
N
BGIOSGA012523
Oryza indica
BGIOSGA012523
N
BGIOSGA012525
Oryza indica
BGIOSGA012525
N
BGIOSGA034613
Oryza indica
BGIOSGA034613
N
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
BGIOSGA036757
Oryza indica
BGIOSGA036757
N
BRADI1G63910
Brachypodium distachyon
BRADI1G63910
N
BRADI4G44342
Brachypodium distachyon
BRADI4G44342
N
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
F775_02479
Aegilops tauschii
F775_02479
N
F775_02480
Aegilops tauschii
F775_02480
N
F775_04232
Aegilops tauschii
F775_04232
N
F775_31089
Aegilops tauschii
F775_31089
N
GRMZM2G030272
Zea mays
GRMZM2G030272
N
GRMZM2G063216
Zea mays
GRMZM2G063216
N
GRMZM2G169564
Zea mays
GRMZM2G169564
N
GRMZM2G400559
Zea mays
GRMZM2G400559
N
LPERR03G13630
Leersia perrieri
LPERR03G13630
N
LPERR11G00970
Leersia perrieri
LPERR11G00970
N
LPERR12G01080
Leersia perrieri
LPERR12G01080
N
MLOC_57764
Hordeum vulgare
MLOC_57764
N
OB03G25300
Oryza brachyantha
OB03G25300
N
OB11G10760
Oryza brachyantha
OB11G10760
N
OB12G11030
Oryza brachyantha
OB12G11030
N
OBART03G15470
Oryza barthii
OBART03G15470
N
OBART11G01100
Oryza barthii
OBART11G01100
N
OBART12G00850
Oryza barthii
OBART12G00850
N
OGLUM01G39380
Oryza glumaepatula
OGLUM01G39380
N
OGLUM03G15660
Oryza glumaepatula
OGLUM03G15660
N
OGLUM12G01400
Oryza glumaepatula
OGLUM12G01400
N
OGLUM12G01420
Oryza glumaepatula
OGLUM12G01420
N
OLONG_001744
Oryza longistaminata
OLONG_001744
N
OMERI01G32500
Oryza meridionalis
OMERI01G32500
N
OMERI11G01520
Oryza meridionalis
OMERI11G01520
N
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
ONIVA01G40380
Oryza nivara
ONIVA01G40380
N
ONIVA03G16490
Oryza nivara
ONIVA03G16490
N
ONIVA11G01050
Oryza nivara
ONIVA11G01050
N
ONIVA11G01070
Oryza nivara
ONIVA11G01070
N
ONIVA11G01230
Oryza nivara
ONIVA11G01230
N
OPUNC01G34290
Oryza punctata
OPUNC01G34290
N
OPUNC03G15030
Oryza punctata
OPUNC03G15030
N
OPUNC11G00970
Oryza punctata
OPUNC11G00970
N
OPUNC11G00980
Oryza punctata
OPUNC11G00980
N
OPUNC12G00970
Oryza punctata
OPUNC12G00970
N
ORGLA01G0292000
Oryza glaberrima
ORGLA01G0292000
N
ORGLA03G0148400
Oryza glaberrima
ORGLA03G0148400
N
ORGLA11G0201900
Oryza glaberrima
ORGLA11G0201900
N
ORGLA12G0007500
Oryza glaberrima
ORGLA12G0007500
N
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
ORUFI01G38680
Oryza rufipogon
ORUFI01G38680
N
ORUFI03G16080
Oryza rufipogon
ORUFI03G16080
N
ORUFI11G01050
Oryza rufipogon
ORUFI11G01050
N
ORUFI12G01180
Oryza rufipogon
ORUFI12G01180
N
OS03G0321700
Oryza sativa
OS03G0321700
N
OS11G0117400
Oryza sativa
OS11G0117400
N
OS11G0117500
Oryza sativa
OS11G0117500
N
OS12G0116600
Oryza sativa
OS12G0116600
N
OS12G0116700
Oryza sativa
OS12G0116700
N
Sb01g036870
Sorghum bicolor
Sb01g036870
N
Sb05g001220
Sorghum bicolor
Sb05g001220
N
Sb08g002560
Sorghum bicolor
Sb08g002560
N
Sb08g002570
Sorghum bicolor
Sb08g002570
N
Si010764m.g
Setaria italica
Si010764m.g
N
Si010832m.g
Setaria italica
Si010832m.g
N
Si019098m.g
Setaria italica
Si019098m.g
N
Si027360m.g
Setaria italica
Si027360m.g
N
Si027876m.g
Setaria italica
Si027876m.g
N
Si039519m.g
Setaria italica
Si039519m.g
N
Traes_4AS_70DF607CC
Triticum aestivum
Traes_4AS_70DF607CC
N
Traes_4BL_A8C6FBEB6
Triticum aestivum
Traes_4BL_A8C6FBEB6
N
Traes_4DL_3140A8240
Triticum aestivum
Traes_4DL_3140A8240
N
Traes_5AL_69A969FF4
Triticum aestivum
Traes_5AL_69A969FF4
N
TRIUR3_01445
Triticum urartu
TRIUR3_01445
N
TRIUR3_01447
Triticum urartu
TRIUR3_01447
N
TRIUR3_06231
Triticum urartu
TRIUR3_06231
N
TRIUR3_20905
Triticum urartu
TRIUR3_20905
N
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
Pavir.Ca00084
Panicum virgatum
Pavir.Ca00084
N
Pavir.Ga01476
Panicum virgatum
Pavir.Ga01476
N
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
Pavir.J09582
Panicum virgatum
Pavir.J09582
N
Pavir.J34713
Panicum virgatum
Pavir.J34713
N