Bostr.19424s1046 (Boechera stricta)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Bostr.19424s1046 T250588_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05550
M06978_2.00 		Arabidopsis thaliana
HNDYCGCCGGMRWND
HNWYKCCGGCGRHND		 Dap-seq
OMalley et al.(2016)
AT5G05550_col_a 		0.874 0.716
AT5G05550
M06979_2.00 		Arabidopsis thaliana
HYNYCGCCGGARWHD
HDWYTCCGGCGRNRD		 Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a 		0.874 0.716
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.19424s1046.1.p MADF 38 110

Links

Other MADF family TFs
Other Boechera stricta TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF384 Homo sapiens ENSG00000126746 D
ENSSHAG00000015330 Sarcophilus harrisii ENSSHAG00000015330 I
ENSONIG00000013041 Oreochromis niloticus ENSONIG00000013041 I
ZNF384 Ochotona princeps ENSOPRG00000003626 I
ENSPANG00000014845 Papio anubis ENSPANG00000014845 I
ZNF384 Procavia capensis ENSPCAG00000012951 I
ENSPFOG00000001513 Poecilia formosa ENSPFOG00000001513 I
ENSPFOG00000015360 Poecilia formosa ENSPFOG00000015360 I
ENSPPYG00000004196 Pongo abelii ENSPPYG00000004196 I
ZNF384 Pan troglodytes ENSPTRG00000004584 I
ZNF384 Pteropus vampyrus ENSPVAG00000011440 I
Zfp384 Rattus norvegicus ENSRNOG00000017066 I
ZNF384 Oryctolagus cuniculus ENSOCUG00000003747 I
ZNF384 Sus scrofa ENSSSCG00000000702 I
ENSSTOG00000009902 Ictidomys tridecemlineatus ENSSTOG00000009902 I
ZNF384 Tursiops truncatus ENSTTRG00000011754 I
ENSXMAG00000016787 Xiphophorus maculatus ENSXMAG00000016787 I
Alligator_sinensis_CCG002534.1 Alligator sinensis Alligator_sinensis_CCG002534.1 I
Cmyd_10003951 Chelonia mydas Cmyd_10003951 I
ENSBTAP00000022702-D1 Bos grunniens ENSBTAP00000022702-D1 I
ENSP00000380019 Macaca fascicularis ENSP00000380019 I
Ogr12333 Ophisaurus gracilis Ogr12333 I
Pvit_12574 Pogona vitticeps Pvit_12574 I
ZNF384 Felis catus ENSFCAG00000006882 I
ENSAMEG00000014121 Ailuropoda melanoleuca ENSAMEG00000014121 I
ZNF384 Bos taurus ENSBTAG00000017072 I
ZNF384 Canis familiaris ENSCAFG00000014740 I
ZNF384 Choloepus hoffmanni ENSCHOG00000006697 I
ZNF384 Callithrix jacchus ENSCJAG00000007944 I
ENSCSAG00000010379 Chlorocebus sabaeus ENSCSAG00000010379 I
ZNF384 Dasypus novemcinctus ENSDNOG00000003936 I
ZNF384 Equus caballus ENSECAG00000009490 I
ZNF384 Erinaceus europaeus ENSEEUG00000012950 I
ENSFALG00000004741 Ficedula albicollis ENSFALG00000004741 I
ZNF384 Otolemur garnettii ENSOGAG00000010052 I
ZNF384 Gorilla gorilla ENSGGOG00000016048 I
ZNF384 Loxodonta africana ENSLAFG00000008381 I
ENSLOCG00000007968 Lepisosteus oculatus ENSLOCG00000007968 I
ZNF384 Myotis lucifugus ENSMLUG00000013771 I
ZNF384 Macaca mulatta ENSMMUG00000016990 I
ZNF384 Monodelphis domestica ENSMODG00000018105 I
ENSMPUG00000016838 Mustela putorius furo ENSMPUG00000016838 I
Zfp384 Mus musculus ENSMUSG00000038346 I
ENSNLEG00000004506 Nomascus leucogenys ENSNLEG00000004506 I
ZNF384 Anolis carolinensis ENSACAG00000006099 I