CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA006672
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA006672
T252980_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA006672-PA
MADS box
19
66
RIDNKERRQVTFTKRRGGLFKKASELALLTGASVAVVVFSPAKHVYAF
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA16G22060
Glycine max
GLYMA16G22060
I
0.000
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.000
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
0.000
GPLIN_000170600
Globodera pallida
GPLIN_000170600
N
0.000
ASIS002444
Anopheles sinensis
ASIS002444
N
0.000
CLEC004367
Cimex lectularius
CLEC004367
N
0.000
MDP0000699531
Malus domestica
MDP0000699531
N
0.000
Lus10035991.g
Linum usitatissimum
Lus10035991.g
N
0.000
Lus10027787.g
Linum usitatissimum
Lus10027787.g
N
0.000
Lus10016695.g
Linum usitatissimum
Lus10016695.g
N
0.000
Lus10013219.g
Linum usitatissimum
Lus10013219.g
N
0.000
Pm010381
Prunus mume
Pm010381
N
0.000
Cla010647
Citrullus lanatus
Cla010647
N
0.000
Ca_10726
Cicer arietinum
Ca_10726
N
0.000
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.000
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.000
PGSC0003DMG400001413
Solanum tuberosum
PGSC0003DMG400001413
N
0.000
OLONG_009629
Oryza longistaminata
OLONG_009629
N
0.000
MYCTH_2294733
Myceliophthora thermophila
MYCTH_2294733
N
0.000
MBR_01289
Metarhizium brunneum
MBR_01289
N
0.000
MAC_03708
Metarhizium acridum
MAC_03708
N
0.000
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.000
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.000
HelroG178674
Helobdella robusta
HelroG178674
N
0.000
TCF7L2
Tursiops truncatus
ENSTTRG00000002360
N
0.000
Bra012832
Brassica rapa
Bra012832
N
0.000