Bra025619 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra025619 T253323_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025619.1-P MADS box 20 62

Links

Other MADS box family TFs
Other Brassica rapa TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL75 Arabidopsis thaliana AT5G41200 I 0.795
scaffold_704060.1 Arabidopsis lyrata scaffold_704060.1 I 0.761
fgenesh2_kg.7__3412__AT5G41200.1 Arabidopsis lyrata fgenesh2_kg.7__3412__AT5G41200.1 I 0.739
Bra025609 Brassica rapa Bra025609 I 0.894
Bostr.10058s0014 Boechera stricta Bostr.10058s0014 I 0.702
Bostr.3751s0031 Boechera stricta Bostr.3751s0031 I 0.721
Thhalv10028184m.g Eutrema salsugineum Thhalv10028184m.g I 0.756
Al_scaffold_0007_3741 Arabidopsis lyrata Al_scaffold_0007_3741 I 0.745
Bo4g139260 Brassica oleracea Bo4g139260 I 0.900
AGL43 Arabidopsis thaliana AT5G40220 I 0.795
AGL76 Arabidopsis thaliana AT5G40120 I 0.745
AGL98 Arabidopsis thaliana AT5G39810 I 0.723
AGL81 Arabidopsis thaliana AT5G39750 I 0.745
AGL77 Arabidopsis thaliana AT5G38740 I 0.745
AGL105 Arabidopsis thaliana AT5G37415 I 0.808
AGL101 Arabidopsis thaliana AT5G27050 I 0.767
Thhalv10028282m.g Eutrema salsugineum Thhalv10028282m.g I 0.739
Bo4g139560 Brassica oleracea Bo4g139560 N 0.867
Bra025607 Brassica rapa Bra025607 N 0.953
Bo4g139640 Brassica oleracea Bo4g139640 N 0.867
Bo4g139620 Brassica oleracea Bo4g139620 N 0.932
AT5G26865 Arabidopsis thaliana AT5G26865 N 0.714