OBART02G04930 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART02G04930 T254956_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G04930.1 MADS box 3 31

Links

Other MADS box family TFs
Other Oryza barthii TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.724
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.724
Si019951m.g Setaria italica Si019951m.g I 0.724
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.724
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.724
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.724
F775_04223 Aegilops tauschii F775_04223 I 0.724
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.759
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.724
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 0.724
OPUNC06G12720 Oryza punctata OPUNC06G12720 N 0.724
OPUNC02G04080 Oryza punctata OPUNC02G04080 N 0.862
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.724
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.724
ORGLA02G0045500 Oryza glaberrima ORGLA02G0045500 N 0.897
ORGLA06G0273400 Oryza glaberrima ORGLA06G0273400 N 0.724
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.724
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.724
ORUFI02G05030 Oryza rufipogon ORUFI02G05030 N 0.897
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 0.724
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.724
OS01G0975800 Oryza sativa OS01G0975800 N 0.724
OS09G0116800 Oryza sativa OS09G0116800 N 0.724
Si032189m.g Setaria italica Si032189m.g N 0.724
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.759
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.759
OGLUM02G04740 Oryza glumaepatula OGLUM02G04740 N 0.897
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.724
BGIOSGA007600 Oryza indica BGIOSGA007600 N 0.897
BGIOSGA022830 Oryza indica BGIOSGA022830 N 0.724
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.724
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.759
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.724
OB06G21580 Oryza brachyantha OB06G21580 N 0.724
OBART01G45740 Oryza barthii OBART01G45740 N 0.724
OBART06G13310 Oryza barthii OBART06G13310 N 0.724
OBART09G00850 Oryza barthii OBART09G00850 N 0.724
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.724
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.724
OGLUM06G14250 Oryza glumaepatula OGLUM06G14250 N 0.724
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.724
OLONG_015132 Oryza longistaminata OLONG_015132 N 0.724
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.724
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.724
OMERI02G05750 Oryza meridionalis OMERI02G05750 N 0.862
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.724
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.724
ONIVA02G05120 Oryza nivara ONIVA02G05120 N 0.897
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.724