orange1.1g038848m.g (Citrus sinensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 orange1.1g038848m.g T258815_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g038848m MADS box 10 54

Links

Other MADS box family TFs
Other Citrus sinensis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.711
MDP0000925348 Malus domestica MDP0000925348 I 0.711
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.711
Pm004396 Prunus mume Pm004396 I 0.711
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.711
mgf026186m Mimulus guttatus mgf026186m I 0.705
cassava32147.m1 Manihot esculenta cassava32147.m1 N 0.756
SapurV1A.1209s0030 Salix purpurea SapurV1A.1209s0030 N 0.729
SapurV1A.0980s0020 Salix purpurea SapurV1A.0980s0020 N 0.727
SapurV1A.0258s0020 Salix purpurea SapurV1A.0258s0020 N 0.727
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N 0.711
Ciclev10013876m.g Citrus clementina Ciclev10013876m.g N 1.000
29333.m001063 Ricinus communis 29333.m001063 N 0.795
TCM_023041 Theobroma cacao TCM_023041 N 0.708
TCM_023006 Theobroma cacao TCM_023006 N 0.733
TCM_022993 Theobroma cacao TCM_022993 N 0.818
POPTR_0016s06850 Populus trichocarpa POPTR_0016s06850 N 0.773
POPTR_0006s21630 Populus trichocarpa POPTR_0006s21630 N 0.778