gene27454-v1.0-hybrid (Fragaria vesca)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 gene27454-v1.0-hybrid T261506_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna27454.1-v1.0-hybrid MBD 221 320

Links

Other MBD family TFs
Other Fragaria vesca TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB59 Arabidopsis thaliana AT5G59780 D
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I
ATMYB48 Arabidopsis thaliana AT3G46130 I
BGIOSGA005283 Oryza indica BGIOSGA005283 I
BGIOSGA019054 Oryza indica BGIOSGA019054 I
BGIOSGA033532 Oryza indica BGIOSGA033532 I
BGIOSGA035986 Oryza indica BGIOSGA035986 I
Bo2g025410 Brassica oleracea Bo2g025410 I
Bo3g130340 Brassica oleracea Bo3g130340 I
Bo8g082570 Brassica oleracea Bo8g082570 I
Bo9g140750 Brassica oleracea Bo9g140750 I
Bra002533 Brassica rapa Bra002533 I
Bra006694 Brassica rapa Bra006694 I
Bra018223 Brassica rapa Bra018223 I
Bra020289 Brassica rapa Bra020289 I
BRADI2G37377 Brachypodium distachyon BRADI2G37377 I
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I
F775_06315 Aegilops tauschii F775_06315 I
F775_14172 Aegilops tauschii F775_14172 I
F775_28589 Aegilops tauschii F775_28589 I
F775_29427 Aegilops tauschii F775_29427 I
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I
GLYMA13G40830 Glycine max GLYMA13G40830 I
GLYMA15G04620 Glycine max GLYMA15G04620 I
GRMZM2G047626 Zea mays GRMZM2G047626 I
GRMZM2G048136 Zea mays GRMZM2G048136 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
GRMZM2G305856 Zea mays GRMZM2G305856 I
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I
GSMUA_Achr10G26730_001 Musa acuminata GSMUA_Achr10G26730_001 I
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I
LPERR01G40120 Leersia perrieri LPERR01G40120 I
LPERR05G01030 Leersia perrieri LPERR05G01030 I
LPERR12G13390 Leersia perrieri LPERR12G13390 I
MLOC_52439 Hordeum vulgare MLOC_52439 I
MLOC_78504 Hordeum vulgare MLOC_78504 I
MTR_2g096380 Medicago truncatula MTR_2g096380 I
MTR_4g063100 Medicago truncatula MTR_4g063100 I
OB01G54920 Oryza brachyantha OB01G54920 I
OB05G11070 Oryza brachyantha OB05G11070 I
OB11G27690 Oryza brachyantha OB11G27690 I
OB12G23080 Oryza brachyantha OB12G23080 I
OBART01G45730 Oryza barthii OBART01G45730 I
OBART05G01080 Oryza barthii OBART05G01080 I
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I
OLONG_004480 Oryza longistaminata OLONG_004480 I
OMERI05G01150 Oryza meridionalis OMERI05G01150 I
ONIVA05G01120 Oryza nivara ONIVA05G01120 I
OPUNC01G44650 Oryza punctata OPUNC01G44650 I
OPUNC05G00970 Oryza punctata OPUNC05G00970 I
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I
ORGLA11G0187400 Oryza glaberrima ORGLA11G0187400 I
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I
ORUFI11G25190 Oryza rufipogon ORUFI11G25190 I
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I
MYBAS1 Oryza sativa OS11G0700500 I
MYBAS2 Oryza sativa OS12G0567300 I
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I
Sb08g018580 Sorghum bicolor Sb08g018580 I
Sb09g001590 Sorghum bicolor Sb09g001590 I
Si022826m.g Setaria italica Si022826m.g I
Si023104m.g Setaria italica Si023104m.g I
Si024470m.g Setaria italica Si024470m.g I
Si026803m.g Setaria italica Si026803m.g I
Solyc06g005330.2 Solanum lycopersicum Solyc06g005330.2 I
Solyc11g073120.1 Solanum lycopersicum Solyc11g073120.1 I
TCM_041904 Theobroma cacao TCM_041904 I
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I
Traes_4AL_8B52D54FD Triticum aestivum Traes_4AL_8B52D54FD I
Traes_4BS_61B30E3E4 Triticum aestivum Traes_4BS_61B30E3E4 I
Traes_4DS_0ECE7A421 Triticum aestivum Traes_4DS_0ECE7A421 I
TRIUR3_16687 Triticum urartu TRIUR3_16687 I
TRIUR3_16862 Triticum urartu TRIUR3_16862 I
TRIUR3_22432 Triticum urartu TRIUR3_22432 I
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I
AtMYB27 Vitis vinifera VIT_08s0007g04830 I
Ca_02593 Cicer arietinum Ca_02593 I
Cla008413 Citrullus lanatus Cla008413 I
Cla013488 Citrullus lanatus Cla013488 I
Pm000809 Prunus mume Pm000809 I
29788.m000340 Ricinus communis 29788.m000340 I
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I
Cucsa.213500 Cucumis sativus Cucsa.213500 I
Cucsa.379880 Cucumis sativus Cucsa.379880 I
mgf020363m Mimulus guttatus mgf020363m I
mgf025691m Mimulus guttatus mgf025691m I
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I
Carubv10017875m.g Capsella rubella Carubv10017875m.g I
Carubv10019409m.g Capsella rubella Carubv10019409m.g I
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I
Gorai.004G145800 Gossypium raimondii Gorai.004G145800 I
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I
Lus10005886.g Linum usitatissimum Lus10005886.g I
MDP0000143156 Malus domestica MDP0000143156 I
MDP0000177010 Malus domestica MDP0000177010 I
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I
Pavir.J04129 Panicum virgatum Pavir.J04129 I
Pavir.J08441 Panicum virgatum Pavir.J08441 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
Pavir.J11826 Panicum virgatum Pavir.J11826 I
Pavir.J33560 Panicum virgatum Pavir.J33560 I
Pavir.J36591 Panicum virgatum Pavir.J36591 I
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
GLYMA10G06680 Glycine max GLYMA10G06680 N
GRMZM2G013581 Zea mays GRMZM2G013581 N
MTR_1g062940 Medicago truncatula MTR_1g062940 N