CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ciclev10000930m.g
(
Citrus clementina
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Ciclev10000930m.g
T264674_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10000930m
mTERF
65
142
GVVQGKKEKLVNRVKICDYLKSLGIIPDELENLELPSTIEVMEERVMFLQKLGLTIDDINEYPLMLGCSMRKNMIPVF
Ciclev10000930m
mTERF
142
450
FSYLEKIGIAKSKLGEFVKKYPQVLHASVVVELMPVVKFLRGLDVEKEDIGYVLMKYPELLGFKLEGTMSTSVAYLVSIGVSPRDIGPMVTQYPYFLGMRVGTMIKPLVDYLVSLGLPIKILARMLEKRVYILGYDLEETVKPNVDCLISFGIRREKLASVIAQYPQIIGLPLKAKMSSQLYFFNLKLKIDPDEFAQVVEKMPQVVSLNQHVIMKSVEFLLGRGIPSGDLAKMVVQCPQLIACRVELMKNSFYFFKSEMGRPIKELIEFPEYFTYSLESRIKPRYQRLQSKGIRCSMNWFLNCSDQRFE
Links
Other
mTERF
family TFs
Other
Citrus clementina
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1517s0032
Capsella grandiflora
Cagra.1517s0032
N
0.830
PK11431.1
Cannabis sativa
PK11431.1
N
0.830
Thhalv10001406m.g
Eutrema salsugineum
Thhalv10001406m.g
N
0.837
SapurV1A.0596s0020
Salix purpurea
SapurV1A.0596s0020
N
0.825
SapurV1A.0287s0020
Salix purpurea
SapurV1A.0287s0020
N
0.780
SapurV1A.0179s0360
Salix purpurea
SapurV1A.0179s0360
N
0.822
orange1.1g048759m.g
Citrus sinensis
orange1.1g048759m.g
N
0.997
Gorai.003G090600
Gossypium raimondii
Gorai.003G090600
N
0.853
evm.TU.supercontig_151.12
Carica papaya
evm.TU.supercontig_151.12
N
0.853
Eucgr.F02687
Eucalyptus grandis
Eucgr.F02687
N
0.724
Carubv10023033m.g
Capsella rubella
Carubv10023033m.g
N
0.832
AT2G44020
Arabidopsis thaliana
AT2G44020
N
0.827
Aquca_009_00307
Aquilegia coerulea
Aquca_009_00307
N
0.798
mgf008193m
Mimulus guttatus
mgf008193m
N
0.791
cassava22183.valid.m1
Manihot esculenta
cassava22183.valid.m1
N
0.772
Pm022294
Prunus mume
Pm022294
N
0.704
Cla017427
Citrullus lanatus
Cla017427
N
0.827
Ca_10412
Cicer arietinum
Ca_10412
N
0.847
TCM_001393
Theobroma cacao
TCM_001393
N
0.861
scaffold_403309.1
Arabidopsis lyrata
scaffold_403309.1
N
0.827
POPTR_0013s12100
Populus trichocarpa
POPTR_0013s12100
N
0.835
Bo4g021230
Brassica oleracea
Bo4g021230
N
0.809