Bo9g166400 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo9g166400 T267647_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.839 0.936
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.839 0.915
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.831 0.915
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.831 0.915
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.821 0.894
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g166400.1 Myb 445 495

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bs Drosophila melanogaster FBgn0004101 D
AARA006326 Anopheles arabiensis AARA006326 I
AMEC009624 Anopheles melas AMEC009624 I
AMAM005702 Anopheles maculatus AMAM005702 I
AFUN006149 Anopheles funestus AFUN006149 I
AFAF006302 Anopheles farauti AFAF006302 I
AEPI007009 Anopheles epiroticus AEPI007009 I
ACUA001543 Anopheles culicifacies ACUA001543 I
ACOM041695 Anopheles coluzzii ACOM041695 I
ACHR006794 Anopheles christyi ACHR006794 I
AATE005744 Anopheles atroparvus AATE005744 I
AQUA001309 Anopheles quadriannulatus AQUA001309 I
AALB009947 Anopheles albimanus AALB009947 I
LDEC007646 Leptinotarsa decemlineata LDEC007646 I
LCUP011662 Lucilia cuprina LCUP011662 I
HHAL001484-PA Halyomorpha halys HHAL001484-PA I
CLEC013393 Cimex lectularius CLEC013393 I
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I
L596_g5274 Steinernema carpocapsae L596_g5274 I
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I
OFLC_0001346401 Onchocerca flexuosa OFLC_0001346401 I
L898_g9834 Steinernema monticolum L898_g9834 I
L893_g14743 Steinernema glaseri L893_g14743 I
L892_g14520 Steinernema scapterisci L892_g14520 I
L889_g24087 Steinernema feltiae L889_g24087 I
AMIN001256 Anopheles minimus AMIN001256 I
D918_07967 Trichuris suis D918_07967 I
D917_02561 Trichinella nativa D917_02561 I
ANCDUO_18278 Ancylostoma duodenale ANCDUO_18278 I
ANCDUO_13359 Ancylostoma duodenale ANCDUO_13359 I
ALUE_0001693901 Ascaris lumbricoides ALUE_0001693901 I
PPAI006358 Phlebotomus papatasi PPAI006358 I
MDOA002443 Musca domestica MDOA002443 I
ASTEI07121 Anopheles stephensi ASTEI07121 I
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I
EFV60876 Trichinella spiralis EFV60876 I
GI21322 Drosophila mojavensis FBgn0144052 I
GH20989 Drosophila grimshawi FBgn0128451 I
GG22961 Drosophila erecta FBgn0115118 I
GF11392 Drosophila ananassae FBgn0088432 I
GA17433 Drosophila pseudoobscura FBgn0077446 I
ENSXMAG00000018559 Xiphophorus maculatus ENSXMAG00000018559 I
SRF Oryzias latipes ENSORLG00000013036 I
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I
SRF Choloepus hoffmanni ENSCHOG00000008671 I
GL20046 Drosophila persimilis FBgn0157643 I
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I
CPIJ016459 Culex quinquefasciatus CPIJ016459 I
CPIJ008336 Culex quinquefasciatus CPIJ008336 I
CJA08385 Caenorhabditis japonica CJA08385 I
BGIBMGA001382 Bombyx mori BGIBMGA001382 I
AGAP010511 Anopheles gambiae AGAP010511 I
ACYPI002973 Acyrthosiphon pisum ACYPI002973 I
ACEP12187 Atta cephalotes ACEP12187 I
AAEL010925 Aedes aegypti AAEL010925 I
ISCW019966 Ixodes scapularis ISCW019966 I
YQE_03076 Dendroctonus ponderosae YQE_03076 I
TC004911 Tribolium castaneum TC004911 I
SMAR003014 Strigamia maritima SMAR003014 I
SINV23963 Solenopsis invicta SINV23963 I
RPRC001752 Rhodnius prolixus RPRC001752 I
NV18787 Nasonia vitripennis NV18787 I
MESCA004860 Megaselia scalaris MESCA004860 I
L798_08800 Zootermopsis nevadensis L798_08800 I
KGM_22252 Danaus plexippus KGM_22252 I
CpipJ_CPIJ016459 Culex pipiens CpipJ_CPIJ016459 I
HMEL017831 Heliconius melpomene HMEL017831 I
HelroG137972 Helobdella robusta HelroG137972 I
GB47234 Apis mellifera GB47234 I
GE14398 Drosophila yakuba FBgn0232006 I
GK22205 Drosophila willistoni FBgn0224190 I
GJ21595 Drosophila virilis FBgn0208714 I
GD11852 Drosophila simulans FBgn0183591 I
GM11854 Drosophila sechellia FBgn0166795 I