28582.m000317 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 28582.m000317 T283731_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
28582.m000317 Myb 183 234

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.764
Ca_07304 Cicer arietinum Ca_07304 I 0.675
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.716
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.716
Bra009228 Brassica rapa Bra009228 I 0.714
Bo9g175820 Brassica oleracea Bo9g175820 I 0.732
mgf007985m Mimulus guttatus mgf007985m N 0.690
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.683
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.683
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.732
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.732
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.732
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.732
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.732
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.665
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.712
mgf007532m Mimulus guttatus mgf007532m N 0.690
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.717
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.750
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.714
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.717
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.732
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.731
MDP0000184307 Malus domestica MDP0000184307 N 0.750
MDP0000253656 Malus domestica MDP0000253656 N 0.750
MDP0000280005 Malus domestica MDP0000280005 N 0.756
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.732
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.665
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.714
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.732
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.732
PK00827.1 Cannabis sativa PK00827.1 N 0.750
POPTR_0453s00230 Populus trichocarpa POPTR_0453s00230 N 0.699
Bo2g007410 Brassica oleracea Bo2g007410 N 0.732
Bo3g004040 Brassica oleracea Bo3g004040 N 0.714
Bra005912 Brassica rapa Bra005912 N 0.714
Bra028717 Brassica rapa Bra028717 N 0.732
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.732
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.764
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.724
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.724
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.716
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.665
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.724
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.714
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.732
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.750
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.665
TCM_024886 Theobroma cacao TCM_024886 N 0.714
Ca_14198 Cicer arietinum Ca_14198 N 0.764
Cla011853 Citrullus lanatus Cla011853 N 0.732
Pm025973 Prunus mume Pm025973 N 0.750
28582.m000316 Ricinus communis 28582.m000316 N 0.732
28582.m000318 Ricinus communis 28582.m000318 N 0.822
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N 0.729
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.732
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.732
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.732