cassava26507.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava26507.m1 T284127_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava26507.m1 Myb 140 186
cassava26507.m1 Myb 192 237

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.707
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.679
Bo2g028290 Brassica oleracea Bo2g028290 I 0.732
Bo3g018490 Brassica oleracea Bo3g018490 I 0.736
Bra006744 Brassica rapa Bra006744 I 0.736
Bra020346 Brassica rapa Bra020346 I 0.736
F775_22212 Aegilops tauschii F775_22212 I 0.679
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.724
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.724
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.757
GLYMA06G19280 Glycine max GLYMA06G19280 I 0.662
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.662
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.662
GRMZM2G302549 Zea mays GRMZM2G302549 I 0.662
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.677
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.661
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.688
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.674
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.692
OB06G13860 Oryza brachyantha OB06G13860 I 0.679
OBART06G04170 Oryza barthii OBART06G04170 I 0.679
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.679
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.679
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.679
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.679
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.679
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.679
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.679
OS06G0162700 Oryza sativa OS06G0162700 I 0.679
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.673
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.747
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.723
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.804
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.757
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.683
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.718
TCM_012087 Theobroma cacao TCM_012087 I 0.732
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.667
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.666
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.679
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.679
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.679
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.757
Ca_17294 Cicer arietinum Ca_17294 I 0.704
Cla019490 Citrullus lanatus Cla019490 I 0.720
Pm000541 Prunus mume Pm000541 I 0.804
Pm024743 Prunus mume Pm024743 I 0.757
30147.m013937 Ricinus communis 30147.m013937 I 0.685
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.754
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.685
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.720
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.723
mg025334m Mimulus guttatus mg025334m I 0.680
mgf023372m Mimulus guttatus mgf023372m I 0.673
mgf024290m Mimulus guttatus mgf024290m I 0.681
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.742
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.715
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.715
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.688
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.712
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.680
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.769
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.757
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.732
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.692
Lus10027695.g Linum usitatissimum Lus10027695.g I 0.664
MDP0000199939 Malus domestica MDP0000199939 I 0.689
MDP0000215359 Malus domestica MDP0000215359 I 0.732
MDP0000319656 Malus domestica MDP0000319656 I 0.801
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.688
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.700
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.700
Pavir.J25000 Panicum virgatum Pavir.J25000 I 0.676
Pavir.J37434 Panicum virgatum Pavir.J37434 I 0.663
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.680
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.723
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.716
MYB64 Arabidopsis thaliana AT5G11050 N 0.732
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.732
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.698
GLYMA05G08761 Glycine max GLYMA05G08761 N 0.669
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.688
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.803
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.751
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.735
GSMUA_Achr8G02290_001 Musa acuminata GSMUA_Achr8G02290_001 N 0.714
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.746
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.776
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.722
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.856
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.866
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.722
TCM_041651 Theobroma cacao TCM_041651 N 0.801
Cla008304 Citrullus lanatus Cla008304 N 0.800
29681.m001315 Ricinus communis 29681.m001315 N 0.880
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.880
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.797
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.739
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.700
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.728
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.728
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.825
Eucgr.J01929 Eucalyptus grandis Eucgr.J01929 N 0.693
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.848
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.822
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.822
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.787
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.783
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.825
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.811
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.847
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.760
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.760
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.797
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N 0.695
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.761