cassava46434.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava46434.m1 T284311_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.704 0.785
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.700 0.796
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.700 0.796
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.700 0.796
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.700 0.796
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.700 0.796
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.700 0.774
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.700 0.763
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.700 0.763
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.698 0.774
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.698 0.774
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.698 0.774
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.695 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava46434.m1 Myb 31 77
cassava46434.m1 Myb 83 128

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB44 Arabidopsis thaliana AT5G67300 D 0.698
OS02G0187700 Oryza sativa OS02G0187700 D 0.695
TVAG_008370 Trichomonas vaginalis TVAG_008370 I
TVAG_017810 Trichomonas vaginalis TVAG_017810 I
TVAG_030320 Trichomonas vaginalis TVAG_030320 I
TVAG_033530 Trichomonas vaginalis TVAG_033530 I
TVAG_034560 Trichomonas vaginalis TVAG_034560 I
TVAG_041220 Trichomonas vaginalis TVAG_041220 I
TVAG_048830 Trichomonas vaginalis TVAG_048830 I
TVAG_049600 Trichomonas vaginalis TVAG_049600 I
TVAG_050010 Trichomonas vaginalis TVAG_050010 I
TVAG_074130 Trichomonas vaginalis TVAG_074130 I
TVAG_085400 Trichomonas vaginalis TVAG_085400 I
TVAG_105110 Trichomonas vaginalis TVAG_105110 I
TVAG_106110 Trichomonas vaginalis TVAG_106110 I
TVAG_122130 Trichomonas vaginalis TVAG_122130 I
TVAG_138190 Trichomonas vaginalis TVAG_138190 I
TVAG_170760 Trichomonas vaginalis TVAG_170760 I
TVAG_170790 Trichomonas vaginalis TVAG_170790 I
TVAG_179440 Trichomonas vaginalis TVAG_179440 I
TVAG_187200 Trichomonas vaginalis TVAG_187200 I
TVAG_194980 Trichomonas vaginalis TVAG_194980 I
TVAG_200950 Trichomonas vaginalis TVAG_200950 I
TVAG_203550 Trichomonas vaginalis TVAG_203550 I
TVAG_208090 Trichomonas vaginalis TVAG_208090 I
TVAG_208170 Trichomonas vaginalis TVAG_208170 I
TVAG_213270 Trichomonas vaginalis TVAG_213270 I
TVAG_217510 Trichomonas vaginalis TVAG_217510 I
TVAG_218720 Trichomonas vaginalis TVAG_218720 I
TVAG_223440 Trichomonas vaginalis TVAG_223440 I
TVAG_236320 Trichomonas vaginalis TVAG_236320 I
TVAG_242410 Trichomonas vaginalis TVAG_242410 I
TVAG_243160 Trichomonas vaginalis TVAG_243160 I
TVAG_255490 Trichomonas vaginalis TVAG_255490 I
TVAG_258650 Trichomonas vaginalis TVAG_258650 I
TVAG_274390 Trichomonas vaginalis TVAG_274390 I
TVAG_281620 Trichomonas vaginalis TVAG_281620 I
TVAG_287290 Trichomonas vaginalis TVAG_287290 I
TVAG_287680 Trichomonas vaginalis TVAG_287680 I
TVAG_297830 Trichomonas vaginalis TVAG_297830 I
TVAG_298530 Trichomonas vaginalis TVAG_298530 I
TVAG_304110 Trichomonas vaginalis TVAG_304110 I
TVAG_312030 Trichomonas vaginalis TVAG_312030 I
TVAG_315670 Trichomonas vaginalis TVAG_315670 I
TVAG_315700 Trichomonas vaginalis TVAG_315700 I
TVAG_317360 Trichomonas vaginalis TVAG_317360 I
TVAG_318220 Trichomonas vaginalis TVAG_318220 I
TVAG_320670 Trichomonas vaginalis TVAG_320670 I
TVAG_321230 Trichomonas vaginalis TVAG_321230 I
TVAG_333520 Trichomonas vaginalis TVAG_333520 I
TVAG_336250 Trichomonas vaginalis TVAG_336250 I
TVAG_347110 Trichomonas vaginalis TVAG_347110 I
TVAG_356580 Trichomonas vaginalis TVAG_356580 I
TVAG_358740 Trichomonas vaginalis TVAG_358740 I
TVAG_384340 Trichomonas vaginalis TVAG_384340 I
TVAG_384980 Trichomonas vaginalis TVAG_384980 I
TVAG_398170 Trichomonas vaginalis TVAG_398170 I
TVAG_406620 Trichomonas vaginalis TVAG_406620 I
TVAG_407290 Trichomonas vaginalis TVAG_407290 I
TVAG_407860 Trichomonas vaginalis TVAG_407860 I
TVAG_417620 Trichomonas vaginalis TVAG_417620 I
TVAG_418370 Trichomonas vaginalis TVAG_418370 I
TVAG_422850 Trichomonas vaginalis TVAG_422850 I
TVAG_428400 Trichomonas vaginalis TVAG_428400 I
TVAG_431290 Trichomonas vaginalis TVAG_431290 I
TVAG_443860 Trichomonas vaginalis TVAG_443860 I
TVAG_446510 Trichomonas vaginalis TVAG_446510 I
TVAG_448590 Trichomonas vaginalis TVAG_448590 I
TVAG_450400 Trichomonas vaginalis TVAG_450400 I
TVAG_451310 Trichomonas vaginalis TVAG_451310 I
TVAG_464320 Trichomonas vaginalis TVAG_464320 I
TVAG_466400 Trichomonas vaginalis TVAG_466400 I
TVAG_469670 Trichomonas vaginalis TVAG_469670 I
TVAG_471660 Trichomonas vaginalis TVAG_471660 I
TVAG_474270 Trichomonas vaginalis TVAG_474270 I
TVAG_481770 Trichomonas vaginalis TVAG_481770 I
TVAG_484270 Trichomonas vaginalis TVAG_484270 I
TVAG_485740 Trichomonas vaginalis TVAG_485740 I
TVAG_490690 Trichomonas vaginalis TVAG_490690 I
TVAG_492320 Trichomonas vaginalis TVAG_492320 I
TVAG_494850 Trichomonas vaginalis TVAG_494850 I
TVAG_500220 Trichomonas vaginalis TVAG_500220 I
TVAG_501520 Trichomonas vaginalis TVAG_501520 I
TVAG_511900 Trichomonas vaginalis TVAG_511900 I
TVAG_514140 Trichomonas vaginalis TVAG_514140 I
TVAG_518010 Trichomonas vaginalis TVAG_518010 I
TVAG_518770 Trichomonas vaginalis TVAG_518770 I
TVAG_525230 Trichomonas vaginalis TVAG_525230 I
TVAG_528950 Trichomonas vaginalis TVAG_528950 I
TVAG_535080 Trichomonas vaginalis TVAG_535080 I
TVAG_535180 Trichomonas vaginalis TVAG_535180 I
TVAG_544290 Trichomonas vaginalis TVAG_544290 I
TVAG_547380 Trichomonas vaginalis TVAG_547380 I
TVAG_551090 Trichomonas vaginalis TVAG_551090 I
TVAG_551410 Trichomonas vaginalis TVAG_551410 I
TVAG_552810 Trichomonas vaginalis TVAG_552810 I
TVAG_555690 Trichomonas vaginalis TVAG_555690 I
TVAG_556150 Trichomonas vaginalis TVAG_556150 I
TVAG_563060 Trichomonas vaginalis TVAG_563060 I
TVAG_563360 Trichomonas vaginalis TVAG_563360 I
TVAG_566490 Trichomonas vaginalis TVAG_566490 I
TVAG_568980 Trichomonas vaginalis TVAG_568980 I
TVAG_578750 Trichomonas vaginalis TVAG_578750 I
TVAG_579860 Trichomonas vaginalis TVAG_579860 I
TVAG_590210 Trichomonas vaginalis TVAG_590210 I
TVAG_595500 Trichomonas vaginalis TVAG_595500 I
TVAG_595910 Trichomonas vaginalis TVAG_595910 I
TVAG_597870 Trichomonas vaginalis TVAG_597870 I
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.679
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.667
MYB25 Arabidopsis thaliana AT2G39880 I 0.664
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.666
Bo1g082480 Brassica oleracea Bo1g082480 I 0.662
Bo2g167960 Brassica oleracea Bo2g167960 I 0.689
Bo7g063830 Brassica oleracea Bo7g063830 I 0.698
Bo7g099180 Brassica oleracea Bo7g099180 I 0.694
Bo7g118450 Brassica oleracea Bo7g118450 I 0.688
Bra007186 Brassica rapa Bra007186 I 0.668
Bra012149 Brassica rapa Bra012149 I 0.698
Bra012910 Brassica rapa Bra012910 I 0.694
Bra017813 Brassica rapa Bra017813 I 0.676
Bra029990 Brassica rapa Bra029990 I 0.669
Bra036048 Brassica rapa Bra036048 I 0.677
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.695
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.688
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.683
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.680
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.695
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.683
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.695
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.699
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.695
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I 0.666
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.695
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.666
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.695
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.666
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.695
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.695
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.666
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.695
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.666
OS06G0637500 Oryza sativa OS06G0637500 I 0.666
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.675
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.691
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.688
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.682
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.848
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.837
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.666
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.675
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.698
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.675
TCM_042474 Theobroma cacao TCM_042474 I 0.683
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I 0.682
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.673
Ca_12468 Cicer arietinum Ca_12468 I 0.677
Cla004431 Citrullus lanatus Cla004431 I 0.664
Cla022889 Citrullus lanatus Cla022889 I 0.834
Cla022947 Citrullus lanatus Cla022947 I 0.661
Pm005220 Prunus mume Pm005220 I 0.837
29801.m003096 Ricinus communis 29801.m003096 I 0.695
29814.m000736 Ricinus communis 29814.m000736 I 0.682
30170.m013927 Ricinus communis 30170.m013927 I 0.869
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.869
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.679
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.672
Cucsa.073130 Cucumis sativus Cucsa.073130 I 0.682
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.837
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.834
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.669
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.661
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.669
mgf002573m Mimulus guttatus mgf002573m I 0.669
mgf014089m Mimulus guttatus mgf014089m I 0.687
mgf020432m Mimulus guttatus mgf020432m I 0.675
mgf025567m Mimulus guttatus mgf025567m I 0.694
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.688
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.671
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.669
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.685
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.698
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.698
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.675
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.698
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.869
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.687
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.673
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.692
Eucgr.J00189 Eucalyptus grandis Eucgr.J00189 I 0.674
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.693
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.878
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I 0.678
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.682
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.668
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.684
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.852
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.694
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.678
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.665
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.677
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.681
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.851
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.677
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.848
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.673
MDP0000298689 Malus domestica MDP0000298689 I 0.664
MDP0000477900 Malus domestica MDP0000477900 I 0.832
MDP0000480596 Malus domestica MDP0000480596 I 0.832
MDP0000641708 Malus domestica MDP0000641708 I 0.832
MDP0000894463 Malus domestica MDP0000894463 I 0.837
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.869
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.687
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.673
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.869
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.691
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.662
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I 0.668
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.698
PK01153.1 Cannabis sativa PK01153.1 I 0.682
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.677
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.700
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.698
TVAG_007350 Trichomonas vaginalis TVAG_007350 N
TVAG_011860 Trichomonas vaginalis TVAG_011860 N
TVAG_048500 Trichomonas vaginalis TVAG_048500 N
TVAG_125240 Trichomonas vaginalis TVAG_125240 N
TVAG_129110 Trichomonas vaginalis TVAG_129110 N
TVAG_129120 Trichomonas vaginalis TVAG_129120 N
TVAG_132500 Trichomonas vaginalis TVAG_132500 N
TVAG_161450 Trichomonas vaginalis TVAG_161450 N
TVAG_164960 Trichomonas vaginalis TVAG_164960 N
TVAG_205770 Trichomonas vaginalis TVAG_205770 N
TVAG_207810 Trichomonas vaginalis TVAG_207810 N
TVAG_261360 Trichomonas vaginalis TVAG_261360 N
TVAG_262670 Trichomonas vaginalis TVAG_262670 N
TVAG_298590 Trichomonas vaginalis TVAG_298590 N
TVAG_300190 Trichomonas vaginalis TVAG_300190 N
TVAG_301700 Trichomonas vaginalis TVAG_301700 N
TVAG_313920 Trichomonas vaginalis TVAG_313920 N
TVAG_372820 Trichomonas vaginalis TVAG_372820 N
TVAG_384790 Trichomonas vaginalis TVAG_384790 N
TVAG_386750 Trichomonas vaginalis TVAG_386750 N
TVAG_410790 Trichomonas vaginalis TVAG_410790 N
TVAG_449400 Trichomonas vaginalis TVAG_449400 N
TVAG_488790 Trichomonas vaginalis TVAG_488790 N
TVAG_515220 Trichomonas vaginalis TVAG_515220 N
TVAG_520250 Trichomonas vaginalis TVAG_520250 N
TVAG_550490 Trichomonas vaginalis TVAG_550490 N
TVAG_579060 Trichomonas vaginalis TVAG_579060 N
TVAG_581440 Trichomonas vaginalis TVAG_581440 N
GLYMA09G12164 Glycine max GLYMA09G12164 N 0.681