Eucgr.D00972 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.D00972 T286816_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.891 0.957
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.891 0.957
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.891 0.957
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.891 0.957
Q5IWM2_WHEAT
M11059_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB80_01 		0.802 0.894
AT3G24120
M00729_2.00 		Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN		 PBM
Chang et al.(2013)
pTH7086 		0.754 0.766
UNE16
M01270_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Lambert et al.(2019)
pTH9967 		0.754 0.766
AT3G24120
M07085_2.00 		Arabidopsis thaliana
HAKATTCB
VGAATMTD		 Dap-seq
OMalley et al.(2016)
At3g24120_col_a 		0.754 0.766
AT3G24120
M07086_2.00 		Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN		 Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a 		0.754 0.766
MYR1
M02309_2.00 		Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN		 PBM
Weirauch et al.(2014)
pTH8859 		0.725 0.745
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.719 0.723
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.719 0.723
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.719 0.723
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.717 0.723
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.717 0.723
PHL12
M01077_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Sullivan et al.(2014)
pTH7098 		0.712 0.766
PHL12
M07079_2.00 		Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY		 Dap-seq
OMalley et al.(2016)
At3g12730_col_a 		0.712 0.766
PHL12
M07080_2.00 		Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a 		0.712 0.766
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.706 0.830
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.706 0.830
AT2G20400
M07046_2.00 		Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN		 Dap-seq
OMalley et al.(2016)
AT2G20400_col_a 		0.686 0.766
AT2G20400
M07047_2.00 		Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY		 Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a 		0.686 0.766
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.672 0.702
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.672 0.702
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.667 0.745
PHR1
M02329_2.00 		Oryza sativa
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7755 		0.667 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D00972.1 Myb 51 102
Eucgr.D00972.2 Myb 51 102
Eucgr.D00972.3 Myb 51 102

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

926 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS02G0266800 Oryza sativa OS02G0266800 D
CPRF2_PETCR Petroselinum crispum CPRF2_PETCR D
estExt_Genewise1.C_2060077 Physcomitrella patens estExt_Genewise1.C_2060077 D
PK05128.1 Cannabis sativa PK05128.1 D
AMTR_s00002p00268140 Amborella trichopoda AMTR_s00002p00268140 I
BGIOSGA006734 Oryza indica BGIOSGA006734 I
BGIOSGA007649 Oryza indica BGIOSGA007649 I
BGIOSGA020738 Oryza indica BGIOSGA020738 I
BGIOSGA020743 Oryza indica BGIOSGA020743 I
BGIOSGA037742 Oryza indica BGIOSGA037742 I
Bo2g012800 Brassica oleracea Bo2g012800 I
Bo7g093030 Brassica oleracea Bo7g093030 I
Bra010010 Brassica rapa Bra010010 I
Bra020620 Brassica rapa Bra020620 I
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I
BZO2H3 Arabidopsis lyrata fgenesh2_kg.6__2797__AT5G28770.2 I
GLYMA01G09510 Glycine max GLYMA01G09510 I
GLYMA02G13960 Glycine max GLYMA02G13960 I
GLYMA03G40730 Glycine max GLYMA03G40730 I
GLYMA10G30410 Glycine max GLYMA10G30410 I
GLYMA19G43420 Glycine max GLYMA19G43420 I
GLYMA20G36750 Glycine max GLYMA20G36750 I
GRMZM2G073427 Zea mays GRMZM2G073427 I
GRMZM2G098904 Zea mays GRMZM2G098904 I
GRMZM2G103647 Zea mays GRMZM2G103647 I
GSMUA_Achr10G08670_001 Musa acuminata GSMUA_Achr10G08670_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr1G15640_001 Musa acuminata GSMUA_Achr1G15640_001 I
GSMUA_Achr1G23640_001 Musa acuminata GSMUA_Achr1G23640_001 I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr4G28530_001 Musa acuminata GSMUA_Achr4G28530_001 I
GSMUA_Achr7G07650_001 Musa acuminata GSMUA_Achr7G07650_001 I
LPERR02G04950 Leersia perrieri LPERR02G04950 I
LPERR06G19690 Leersia perrieri LPERR06G19690 I
LPERR12G15130 Leersia perrieri LPERR12G15130 I
MTR_1g080920 Medicago truncatula MTR_1g080920 I
MTR_7g029400 Medicago truncatula MTR_7g029400 I
MTR_7g115120 Medicago truncatula MTR_7g115120 I
OB02G14920 Oryza brachyantha OB02G14920 I
OB02G19520 Oryza brachyantha OB02G19520 I
OB06G31430 Oryza brachyantha OB06G31430 I
OBART02G05680 Oryza barthii OBART02G05680 I
OBART02G11580 Oryza barthii OBART02G11580 I
OBART06G23730 Oryza barthii OBART06G23730 I
OBART12G18120 Oryza barthii OBART12G18120 I
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I
OGLUM06G24950 Oryza glumaepatula OGLUM06G24950 I
OGLUM12G19660 Oryza glumaepatula OGLUM12G19660 I
OLONG_019560 Oryza longistaminata OLONG_019560 I
OLONG_021042 Oryza longistaminata OLONG_021042 I
OMERI02G06470 Oryza meridionalis OMERI02G06470 I
OMERI02G12230 Oryza meridionalis OMERI02G12230 I
OMERI06G23650 Oryza meridionalis OMERI06G23650 I
ONIVA02G06040 Oryza nivara ONIVA02G06040 I
ONIVA02G12920 Oryza nivara ONIVA02G12920 I
ONIVA06G27820 Oryza nivara ONIVA06G27820 I
ONIVA12G16860 Oryza nivara ONIVA12G16860 I
OPUNC02G10230 Oryza punctata OPUNC02G10230 I
OPUNC06G21410 Oryza punctata OPUNC06G21410 I
OPUNC12G16360 Oryza punctata OPUNC12G16360 I
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I
ORGLA06G0198800 Oryza glaberrima ORGLA06G0198800 I
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I
ORUFI06G25410 Oryza rufipogon ORUFI06G25410 I
ORUFI12G20050 Oryza rufipogon ORUFI12G20050 I
OS02G0175100 Oryza sativa OS02G0175100 I
OS06G0662200 Oryza sativa OS06G0662200 I
OS12G0601800 Oryza sativa OS12G0601800 I
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I
PGSC0003DMG400019455 Solanum tuberosum PGSC0003DMG400019455 I
POPTR_0002s04660 Populus trichocarpa POPTR_0002s04660 I
POPTR_0006s29250 Populus trichocarpa POPTR_0006s29250 I
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I
POPTR_0013s03800 Populus trichocarpa POPTR_0013s03800 I
PRUPE_ppa005367mg Prunus persica PRUPE_ppa005367mg I
PRUPE_ppa005585mg Prunus persica PRUPE_ppa005585mg I
PRUPE_ppa007814mg Prunus persica PRUPE_ppa007814mg I
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I
Sb04g005020 Sorghum bicolor Sb04g005020 I
Sb08g020600 Sorghum bicolor Sb08g020600 I
Sb10g026450 Sorghum bicolor Sb10g026450 I
Si007043m.g Setaria italica Si007043m.g I
Si017778m.g Setaria italica Si017778m.g I
Solyc01g097330.2 Solanum lycopersicum Solyc01g097330.2 I
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I
Solyc08g022080.2 Solanum lycopersicum Solyc08g022080.2 I
TCM_004222 Theobroma cacao TCM_004222 I
TCM_026349 Theobroma cacao TCM_026349 I
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I
ATBZIP9 Vitis vinifera VIT_04s0008g02750 I
VIT_07s0141g00170 Vitis vinifera VIT_07s0141g00170 I
BZO2H3 Vitis vinifera VIT_14s0030g02200 I
Ca_01234 Cicer arietinum Ca_01234 I
Ca_03753 Cicer arietinum Ca_03753 I
Cla005975 Citrullus lanatus Cla005975 I
Cla011478 Citrullus lanatus Cla011478 I
Cla015037 Citrullus lanatus Cla015037 I
Cla016748 Citrullus lanatus Cla016748 I
Cla020112 Citrullus lanatus Cla020112 I
Cla020641 Citrullus lanatus Cla020641 I
Pm003522 Prunus mume Pm003522 I
Pm005087 Prunus mume Pm005087 I
Pm020231 Prunus mume Pm020231 I
29598.m000468 Ricinus communis 29598.m000468 I
29883.m001986 Ricinus communis 29883.m001986 I
30131.m007078 Ricinus communis 30131.m007078 I
30138.m003866 Ricinus communis 30138.m003866 I
cassava18334.valid.m1 Manihot esculenta cassava18334.valid.m1 I
cassava18571.valid.m1 Manihot esculenta cassava18571.valid.m1 I
cassava18832.valid.m1 Manihot esculenta cassava18832.valid.m1 I
cassava18833.valid.m1 Manihot esculenta cassava18833.valid.m1 I
cassava22706.valid.m1 Manihot esculenta cassava22706.valid.m1 I
cassava24010.valid.m1 Manihot esculenta cassava24010.valid.m1 I
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava32522.m1 Manihot esculenta cassava32522.m1 I
cassava46237.m1 Manihot esculenta cassava46237.m1 I
Cucsa.133290 Cucumis sativus Cucsa.133290 I
Cucsa.238410 Cucumis sativus Cucsa.238410 I
Cucsa.284240 Cucumis sativus Cucsa.284240 I
Cucsa.289120 Cucumis sativus Cucsa.289120 I
Cucsa.388800 Cucumis sativus Cucsa.388800 I
estExt_fgenesh1_pg.C_2060068 Physcomitrella patens estExt_fgenesh1_pg.C_2060068 I
gw1.220.22.1 Physcomitrella patens gw1.220.22.1 I
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I
mgf007535m Mimulus guttatus mgf007535m I
mgf009803m Mimulus guttatus mgf009803m I
mgf012838m Mimulus guttatus mgf012838m I
mgf013074m Mimulus guttatus mgf013074m I
mgf017392m Mimulus guttatus mgf017392m I
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I
Aquca_017_00582 Aquilegia coerulea Aquca_017_00582 I
Aquca_018_00141 Aquilegia coerulea Aquca_018_00141 I
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I
Ciclev10001051m.g Citrus clementina Ciclev10001051m.g I
Ciclev10008515m.g Citrus clementina Ciclev10008515m.g I
Ciclev10020133m.g Citrus clementina Ciclev10020133m.g I
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I
Eucgr.C03986 Eucalyptus grandis Eucgr.C03986 I
Eucgr.H04338 Eucalyptus grandis Eucgr.H04338 I
evm.TU.supercontig_52.101 Carica papaya evm.TU.supercontig_52.101 I
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I
gene16561-v1.0-hybrid Fragaria vesca gene16561-v1.0-hybrid I
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I
Gorai.004G075400 Gossypium raimondii Gorai.004G075400 I
Gorai.004G218300 Gossypium raimondii Gorai.004G218300 I
Gorai.004G246700 Gossypium raimondii Gorai.004G246700 I
Gorai.007G141500 Gossypium raimondii Gorai.007G141500 I
Gorai.007G277300 Gossypium raimondii Gorai.007G277300 I
Lus10006590.g Linum usitatissimum Lus10006590.g I
Lus10013059.g Linum usitatissimum Lus10013059.g I
Lus10015913.g Linum usitatissimum Lus10015913.g I
Lus10026973.g Linum usitatissimum Lus10026973.g I
Lus10029101.g Linum usitatissimum Lus10029101.g I
MDP0000176747 Malus domestica MDP0000176747 I
MDP0000183562 Malus domestica MDP0000183562 I
MDP0000270365 Malus domestica MDP0000270365 I
MDP0000431572 Malus domestica MDP0000431572 I
MDP0000441891 Malus domestica MDP0000441891 I
MDP0000891108 Malus domestica MDP0000891108 I
MDP0000891899 Malus domestica MDP0000891899 I
orange1.1g012287m.g Citrus sinensis orange1.1g012287m.g I
orange1.1g013166m.g Citrus sinensis orange1.1g013166m.g I
orange1.1g015739m.g Citrus sinensis orange1.1g015739m.g I
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I
Pavir.Ca02738 Panicum virgatum Pavir.Ca02738 I
Pavir.Db00496 Panicum virgatum Pavir.Db00496 I
SapurV1A.0006s1330 Salix purpurea SapurV1A.0006s1330 I
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I
SapurV1A.0110s0140 Salix purpurea SapurV1A.0110s0140 I
SapurV1A.0729s0180 Salix purpurea SapurV1A.0729s0180 I
Thhalv10004611m.g Eutrema salsugineum Thhalv10004611m.g I
PK09738.1 Cannabis sativa PK09738.1 I
PK11472.1 Cannabis sativa PK11472.1 I
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I
chr5.LjT29J15.10.nc Lotus japonicus chr5.LjT29J15.10.nc I
PDK_20s1417191g003 Phoenix dactylifera PDK_20s1417191g003 I
PDK_20s1482361g001 Phoenix dactylifera PDK_20s1482361g001 I