Eucgr.D02320 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.D02320 T286828_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.909 0.957
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.901 0.935
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.901 0.935
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.901 0.935
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.901 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.901 0.935
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.899 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.899 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.899 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.870
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.803 0.935
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.803 0.935
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.803 0.935
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02320.1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtbZIP52 Arabidopsis thaliana AT1G06850 D
BZIP18 Arabidopsis thaliana AT2G40620 D
PK00315.1 Cannabis sativa PK00315.1 D
PK16335.1 Cannabis sativa PK16335.1 D
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I
BGIOSGA012577 Oryza indica BGIOSGA012577 I
BGIOSGA023710 Oryza indica BGIOSGA023710 I
Bo4g012700 Brassica oleracea Bo4g012700 I
Bo4g190320 Brassica oleracea Bo4g190320 I
Bo8g007220 Brassica oleracea Bo8g007220 I
Bo8g114410 Brassica oleracea Bo8g114410 I
Bra004582 Brassica rapa Bra004582 I
Bra016980 Brassica rapa Bra016980 I
Bra030663 Brassica rapa Bra030663 I
Bra031541 Brassica rapa Bra031541 I
F775_31774 Aegilops tauschii F775_31774 I
F775_32183 Aegilops tauschii F775_32183 I
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I
GLYMA02G40270 Glycine max GLYMA02G40270 I
GLYMA11G30940 Glycine max GLYMA11G30940 I
GLYMA14G38460 Glycine max GLYMA14G38460 I
GLYMA18G05880 Glycine max GLYMA18G05880 I
GRMZM2G062391 Zea mays GRMZM2G062391 I
GRMZM2G151295 Zea mays GRMZM2G151295 I
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I
GSMUA_Achr5G29650_001 Musa acuminata GSMUA_Achr5G29650_001 I
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I
LPERR03G14390 Leersia perrieri LPERR03G14390 I
LPERR07G23230 Leersia perrieri LPERR07G23230 I
MLOC_44311 Hordeum vulgare MLOC_44311 I
MLOC_60045 Hordeum vulgare MLOC_60045 I
MTR_3g094020 Medicago truncatula MTR_3g094020 I
MTR_3g467120 Medicago truncatula MTR_3g467120 I
MTR_5g075390 Medicago truncatula MTR_5g075390 I
OB03G26210 Oryza brachyantha OB03G26210 I
OB07G31840 Oryza brachyantha OB07G31840 I
OBART03G16510 Oryza barthii OBART03G16510 I
OBART07G26390 Oryza barthii OBART07G26390 I
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I
OLONG_008214 Oryza longistaminata OLONG_008214 I
OLONG_019327 Oryza longistaminata OLONG_019327 I
OMERI03G14760 Oryza meridionalis OMERI03G14760 I
OMERI07G23010 Oryza meridionalis OMERI07G23010 I
ONIVA03G17500 Oryza nivara ONIVA03G17500 I
ONIVA07G26100 Oryza nivara ONIVA07G26100 I
OPUNC03G15960 Oryza punctata OPUNC03G15960 I
OPUNC07G24840 Oryza punctata OPUNC07G24840 I
ORGLA03G0157900 Oryza glaberrima ORGLA03G0157900 I
ORGLA07G0207300 Oryza glaberrima ORGLA07G0207300 I
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I
RF2B Oryza sativa OS03G0336200 I
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I
Si030224m.g Setaria italica Si030224m.g I
Si036380m.g Setaria italica Si036380m.g I
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I
TCM_042286 Theobroma cacao TCM_042286 I
TCM_045524 Theobroma cacao TCM_045524 I
Traes_2AS_3B7BE6FDC Triticum aestivum Traes_2AS_3B7BE6FDC I
Traes_2BS_1B0F27580 Triticum aestivum Traes_2BS_1B0F27580 I
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I
Ca_04108 Cicer arietinum Ca_04108 I
Ca_08929 Cicer arietinum Ca_08929 I
Ca_15657 Cicer arietinum Ca_15657 I
Cla007409 Citrullus lanatus Cla007409 I
Cla013626 Citrullus lanatus Cla013626 I
Pm000251 Prunus mume Pm000251 I
Pm019060 Prunus mume Pm019060 I
29729.m002363 Ricinus communis 29729.m002363 I
29804.m001495 Ricinus communis 29804.m001495 I
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I
Cucsa.118900 Cucumis sativus Cucsa.118900 I
Cucsa.143950 Cucumis sativus Cucsa.143950 I
mgf007830m Mimulus guttatus mgf007830m I
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I
Cagra.1642s0027 Capsella grandiflora Cagra.1642s0027 I
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I
Carubv10009673m.g Capsella rubella Carubv10009673m.g I
Carubv10025182m.g Capsella rubella Carubv10025182m.g I
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I
Gorai.010G218700 Gossypium raimondii Gorai.010G218700 I
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I
Lus10008605.g Linum usitatissimum Lus10008605.g I
Lus10009907.g Linum usitatissimum Lus10009907.g I
Lus10012881.g Linum usitatissimum Lus10012881.g I
Lus10030531.g Linum usitatissimum Lus10030531.g I
Lus10042211.g Linum usitatissimum Lus10042211.g I
MDP0000129203 Malus domestica MDP0000129203 I
MDP0000210251 Malus domestica MDP0000210251 I
MDP0000247372 Malus domestica MDP0000247372 I
MDP0000297791 Malus domestica MDP0000297791 I
MDP0000305387 Malus domestica MDP0000305387 I
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I
Pavir.J07252 Panicum virgatum Pavir.J07252 I
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I
LjSGA_023972.1 Lotus japonicus LjSGA_023972.1 I
PDK_20s1367981g001 Phoenix dactylifera PDK_20s1367981g001 I