Genemark1.1008_g (Coccomyxa subellipsoidea C169)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Genemark1.1008_g T287430_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
59046 Myb 17 53

Links

Other Myb/SANT family TFs
Other Coccomyxa subellipsoidea C169 TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SVP Arabidopsis thaliana AT2G22540 D
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I
AGL24 Arabidopsis thaliana AT4G24540 I
BGIOSGA011317 Oryza indica BGIOSGA011317 I
Bo1g039080 Brassica oleracea Bo1g039080 I
Bo4g149800 Brassica oleracea Bo4g149800 I
Bo7g109590 Brassica oleracea Bo7g109590 I
Bo8g101000 Brassica oleracea Bo8g101000 I
Bra013812 Brassica rapa Bra013812 I
Bra019221 Brassica rapa Bra019221 I
Bra030228 Brassica rapa Bra030228 I
Bra038511 Brassica rapa Bra038511 I
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I
AGL24 Arabidopsis lyrata fgenesh2_kg.7__1822__AT4G24540.1 I
GLYMA01G02880 Glycine max GLYMA01G02880 I
GLYMA02G04710 Glycine max GLYMA02G04710 I
GLYMA04G10015 Glycine max GLYMA04G10015 I
GLYMA06G10020 Glycine max GLYMA06G10020 I
GLYMA15G06302 Glycine max GLYMA15G06302 I
GRMZM2G059102 Zea mays GRMZM2G059102 I
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I
LPERR03G05670 Leersia perrieri LPERR03G05670 I
MTR_5g032150 Medicago truncatula MTR_5g032150 I
MTR_5g032520 Medicago truncatula MTR_5g032520 I
MTR_5g066180 Medicago truncatula MTR_5g066180 I
OBART03G06320 Oryza barthii OBART03G06320 I
OGLUM03G06330 Oryza glumaepatula OGLUM03G06330 I
OMERI03G06190 Oryza meridionalis OMERI03G06190 I
ONIVA02G06550 Oryza nivara ONIVA02G06550 I
OPUNC03G06100 Oryza punctata OPUNC03G06100 I
ORGLA03G0061100 Oryza glaberrima ORGLA03G0061100 I
ORUFI03G06210 Oryza rufipogon ORUFI03G06210 I
OS03G0186600 Oryza sativa OS03G0186600 I
PGSC0003DMG400009363 Solanum tuberosum PGSC0003DMG400009363 I
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I
PGSC0003DMG400033570 Solanum tuberosum PGSC0003DMG400033570 I
POPTR_0002s10570 Populus trichocarpa POPTR_0002s10570 I
POPTR_0007s03270 Populus trichocarpa POPTR_0007s03270 I
POPTR_0007s03290 Populus trichocarpa POPTR_0007s03290 I
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I
PRUPE_ppa010714mg Prunus persica PRUPE_ppa010714mg I
PRUPE_ppa010758mg Prunus persica PRUPE_ppa010758mg I
PRUPE_ppa010822mg Prunus persica PRUPE_ppa010822mg I
PRUPE_ppa011063mg Prunus persica PRUPE_ppa011063mg I
PRUPE_ppa011123mg Prunus persica PRUPE_ppa011123mg I
PRUPE_ppa018667mg Prunus persica PRUPE_ppa018667mg I
PRUPE_ppa022274mg Prunus persica PRUPE_ppa022274mg I
PRUPE_ppb017585mg Prunus persica PRUPE_ppb017585mg I
Sb01g044810 Sorghum bicolor Sb01g044810 I
Si037358m.g Setaria italica Si037358m.g I
Solyc01g087990.2 Solanum lycopersicum Solyc01g087990.2 I
Solyc01g105800.2 Solanum lycopersicum Solyc01g105800.2 I
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I
TCM_000992 Theobroma cacao TCM_000992 I
TCM_007378 Theobroma cacao TCM_007378 I
TCM_034501 Theobroma cacao TCM_034501 I
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I
SVP Vitis vinifera VIT_00s0313g00070 I
VIT_03s0017g00360 Vitis vinifera VIT_03s0017g00360 I
VIT_15s0107g00120 Vitis vinifera VIT_15s0107g00120 I
AGL24 Vitis vinifera VIT_18s0001g07460 I
Ca_01491 Cicer arietinum Ca_01491 I
Ca_12416 Cicer arietinum Ca_12416 I
Ca_21060 Cicer arietinum Ca_21060 I
Cla014322 Citrullus lanatus Cla014322 I
Cla022499 Citrullus lanatus Cla022499 I
Pm002166 Prunus mume Pm002166 I
Pm004415 Prunus mume Pm004415 I
Pm004416 Prunus mume Pm004416 I
Pm004418 Prunus mume Pm004418 I
Pm004419 Prunus mume Pm004419 I
Pm004420 Prunus mume Pm004420 I
Pm022002 Prunus mume Pm022002 I
29838.m001690 Ricinus communis 29838.m001690 I
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I
cassava31070.valid.m1 Manihot esculenta cassava31070.valid.m1 I
cassava31071.valid.m1 Manihot esculenta cassava31071.valid.m1 I
cassava42879.valid.m1 Manihot esculenta cassava42879.valid.m1 I
Cucsa.104010 Cucumis sativus Cucsa.104010 I
Cucsa.160640 Cucumis sativus Cucsa.160640 I
mgf015964m Mimulus guttatus mgf015964m I
mgf018870m Mimulus guttatus mgf018870m I
Aquca_015_00177 Aquilegia coerulea Aquca_015_00177 I
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I
Bostr.7867s0261 Boechera stricta Bostr.7867s0261 I
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I
Cagra.2171s0007 Capsella grandiflora Cagra.2171s0007 I
Carubv10005653m.g Capsella rubella Carubv10005653m.g I
Carubv10023941m.g Capsella rubella Carubv10023941m.g I
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I
Ciclev10029776m.g Citrus clementina Ciclev10029776m.g I
Eucgr.F00420 Eucalyptus grandis Eucgr.F00420 I
Eucgr.F02141 Eucalyptus grandis Eucgr.F02141 I
Eucgr.F02145 Eucalyptus grandis Eucgr.F02145 I
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I
evm.TU.supercontig_55.31 Carica papaya evm.TU.supercontig_55.31 I
gene03714-v1.0-hybrid Fragaria vesca gene03714-v1.0-hybrid I
gene03748-v1.0-hybrid Fragaria vesca gene03748-v1.0-hybrid I
gene05180-v1.0-hybrid Fragaria vesca gene05180-v1.0-hybrid I
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I
gene12120-v1.0-hybrid Fragaria vesca gene12120-v1.0-hybrid I
gene20808-v1.0-hybrid Fragaria vesca gene20808-v1.0-hybrid I
gene30741-v1.0-hybrid Fragaria vesca gene30741-v1.0-hybrid I
Gorai.002G142700 Gossypium raimondii Gorai.002G142700 I
Gorai.005G225500 Gossypium raimondii Gorai.005G225500 I
Gorai.008G017200 Gossypium raimondii Gorai.008G017200 I
Gorai.008G092300 Gossypium raimondii Gorai.008G092300 I
Gorai.010G035000 Gossypium raimondii Gorai.010G035000 I
Gorai.013G055700 Gossypium raimondii Gorai.013G055700 I
Lus10025719.g Linum usitatissimum Lus10025719.g I
Lus10035942.g Linum usitatissimum Lus10035942.g I
MDP0000209705 Malus domestica MDP0000209705 I
MDP0000233948 Malus domestica MDP0000233948 I
MDP0000255146 Malus domestica MDP0000255146 I
MDP0000259294 Malus domestica MDP0000259294 I
MDP0000322567 Malus domestica MDP0000322567 I
MDP0000378412 Malus domestica MDP0000378412 I
MDP0000527190 Malus domestica MDP0000527190 I
orange1.1g027190m.g Citrus sinensis orange1.1g027190m.g I
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I
orange1.1g040972m.g Citrus sinensis orange1.1g040972m.g I
Pavir.Ia04527 Panicum virgatum Pavir.Ia04527 I
Pavir.Ib00555 Panicum virgatum Pavir.Ib00555 I
SapurV1A.0004s1140 Salix purpurea SapurV1A.0004s1140 I
SapurV1A.0187s0010 Salix purpurea SapurV1A.0187s0010 I
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I
Thhalv10026757m.g Eutrema salsugineum Thhalv10026757m.g I
PK10580.1 Cannabis sativa PK10580.1 I
LjT38P01.180.nd Lotus japonicus LjT38P01.180.nd I
MDP0000132226 Malus domestica MDP0000132226 N
MDP0000143531 Malus domestica MDP0000143531 N
MDP0000277582 Malus domestica MDP0000277582 N
MDP0000311107 Malus domestica MDP0000311107 N