orange1.1g022439m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g022439m.g T288840_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.733 0.837
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.733 0.837
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.733 0.837
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022439m Myb 123 168

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Q8RUX5_MAIZE Zea mays Q8RUX5_MAIZE D
Sb10g006570 Sorghum bicolor Sb10g006570 I
Pavir.J01189 Panicum virgatum Pavir.J01189 I
Pavir.Da02101 Panicum virgatum Pavir.Da02101 I
TRIUR3_35104 Triticum urartu TRIUR3_35104 I
TRIUR3_31684 Triticum urartu TRIUR3_31684 I
Traes_7BS_62FDC3C38 Triticum aestivum Traes_7BS_62FDC3C38 I
Si032599m.g Setaria italica Si032599m.g I
Si032172m.g Setaria italica Si032172m.g I
Si025176m.g Setaria italica Si025176m.g I
Si007889m.g Setaria italica Si007889m.g I
Sb10g009580 Sorghum bicolor Sb10g009580 I
F775_02244 Aegilops tauschii F775_02244 I
Sb10g005020 Sorghum bicolor Sb10g005020 I
OPUNC06G04640 Oryza punctata OPUNC06G04640 I
MLOC_54039 Hordeum vulgare MLOC_54039 I
MLOC_16598 Hordeum vulgare MLOC_16598 I
GRMZM2G121111 Zea mays GRMZM2G121111 I
GRMZM2G111306 Zea mays GRMZM2G111306 I
GRMZM2G030403 Zea mays GRMZM2G030403 I
F775_29040 Aegilops tauschii F775_29040 I
F775_03070 Aegilops tauschii F775_03070 I