Pavir.J06554 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J06554 T289338_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J06554.1.p Myb 7 35

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB3 Arabidopsis thaliana AT1G22640 D 0.737
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.819
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.686
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.678
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.687
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.729
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.690
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.727
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.754
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.689
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.743
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.677
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.678
Traes_5AS_D238844BB Triticum aestivum Traes_5AS_D238844BB N 0.759
mgf021965m Mimulus guttatus mgf021965m N 0.663
mg021480m Mimulus guttatus mg021480m N 0.730
e_gw1.1.4.1 Physcomitrella patens e_gw1.1.4.1 N 0.690
29212.m000177 Ricinus communis 29212.m000177 N 0.679
MDP0000911051 Malus domestica MDP0000911051 N 0.690
Traes_4BL_61E35C455 Triticum aestivum Traes_4BL_61E35C455 N 0.678
mgf025944m Mimulus guttatus mgf025944m N 0.816
Ciclev10023519m.g Citrus clementina Ciclev10023519m.g N 0.712
evm.TU.supercontig_34.3 Carica papaya evm.TU.supercontig_34.3 N 0.708
gene24516-v1.0-hybrid Fragaria vesca gene24516-v1.0-hybrid N 0.678
MDP0000119369 Malus domestica MDP0000119369 N 0.699
PGSC0003DMG400004610 Solanum tuberosum PGSC0003DMG400004610 N 0.678
Pavir.J11191 Panicum virgatum Pavir.J11191 N 0.663
PK00358.1 Cannabis sativa PK00358.1 N 0.720
Traes_3DL_D9A29948B Triticum aestivum Traes_3DL_D9A29948B N 0.689
Traes_3AL_F09C7CA19 Triticum aestivum Traes_3AL_F09C7CA19 N 0.689
Traes_2DL_0E9BE0271 Triticum aestivum Traes_2DL_0E9BE0271 N 0.669
Traes_1BL_A44464337 Triticum aestivum Traes_1BL_A44464337 N 0.751
AMTR_s00009p00257950 Amborella trichopoda AMTR_s00009p00257950 N 0.723
OS12G0515300 Oryza sativa OS12G0515300 N 0.699
OS08G0548000 Oryza sativa OS08G0548000 N 0.669
OS07G0634900 Oryza sativa OS07G0634900 N 0.723
OS04G0517100 Oryza sativa OS04G0517100 N 0.686
OS01G0685400 Oryza sativa OS01G0685400 N 0.771
OLONG_005719 Oryza longistaminata OLONG_005719 N 0.708
MLOC_71332 Hordeum vulgare MLOC_71332 N 0.689
MLOC_59184 Hordeum vulgare MLOC_59184 N 0.731
MLOC_12474 Hordeum vulgare MLOC_12474 N 0.684
MYB95 Arabidopsis thaliana AT1G74430 N 0.671
AMTR_s00133p00075670 Amborella trichopoda AMTR_s00133p00075670 N 0.663