Thhalv10020579m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10020579m.g T290108_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.784 0.886
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.710 0.764
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.710 0.764
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.693 0.786
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.682 0.779
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10020579m Myb 75 121
Thhalv10020579m Myb 127 173
Thhalv10020579m Myb 179 224

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm2567 Brugia malayi Bm2567 D
CJA05633_CONSTRUCT PBM CONSTRUCTS CJA05633_CONSTRUCT D
dmd-3 Caenorhabditis elegans WBGene00012832 D
dmd-10 Caenorhabditis elegans WBGene00007929 D
WUBG_11979 Wuchereria bancrofti WUBG_11979 D
CBN06605 Caenorhabditis brenneri CBN06605 D
CBG09413 Caenorhabditis briggsae CBG09413 D
TELCIR_05158 Teladorsagia circumcincta TELCIR_05158 I
L893_g31098 Steinernema glaseri L893_g31098 I
L898_g30067 Steinernema monticolum L898_g30067 I
L898_g33808 Steinernema monticolum L898_g33808 I
L892_g27879 Steinernema scapterisci L892_g27879 I
nAv.1.0.1.g01085 Acanthocheilonema viteae nAv.1.0.1.g01085 I
nAv.1.0.1.g09212 Acanthocheilonema viteae nAv.1.0.1.g09212 I
NBR_0000774001 Nippostrongylus brasiliensis NBR_0000774001 I
nDi.2.2.2.g08811 Dirofilaria immitis nDi.2.2.2.g08811 I
nDi.2.2.2.g10419 Dirofilaria immitis nDi.2.2.2.g10419 I
NECAME_07661 Necator americanus NECAME_07661 I
nLs.2.1.2.g05589 Litomosoides sigmodontis nLs.2.1.2.g05589 I
nOo.2.0.1.g05035 Onchocerca ochengi nOo.2.0.1.g05035 I
nOo.2.0.1.g12565 Onchocerca ochengi nOo.2.0.1.g12565 I
OESDEN_09202 Oesophagostomum dentatum OESDEN_09202 I
PTRK_0001597400 Parastrongyloides trichosuri PTRK_0001597400 I
SPAL_0001233100 Strongyloides papillosus SPAL_0001233100 I
SVE_0753200 Strongyloides venezuelensis SVE_0753200 I
SVE_1703300 Strongyloides venezuelensis SVE_1703300 I
TCLT_0000243901 Thelazia callipaeda TCLT_0000243901 I
ASIM_0001608201 Anisakis simplex ASIM_0001608201 I
CJA05020 Caenorhabditis japonica CJA05020 I
CJA37832 Caenorhabditis japonica CJA37832 I
CRE31027 Caenorhabditis remanei CRE31027 I
LOAG_11460 Loa loa LOAG_11460 I
WBGene00242643 Onchocerca volvulus WBGene00242643 I
ANCCAN_13991 Ancylostoma caninum ANCCAN_13991 I
ANCDUO_19569 Ancylostoma duodenale ANCDUO_19569 I
ASIM_0000241101 Anisakis simplex ASIM_0000241101 I
ASIM_0000264301 Anisakis simplex ASIM_0000264301 I
L892_g22881 Steinernema scapterisci L892_g22881 I
BTMF_0001653601 Brugia timori BTMF_0001653601 I
BTMF_0001659501 Brugia timori BTMF_0001659501 I
BXY_0200700 Bursaphelenchus xylophilus BXY_0200700 I
BXY_0352300 Bursaphelenchus xylophilus BXY_0352300 I
DME_0001004201 Dracunculus medinensis DME_0001004201 I
EEL_0000689901 Elaeophora elaphi EEL_0000689901 I
EVEC_0001123001 Enterobius vermicularis EVEC_0001123001 I
Hba_18605 Heterorhabditis bacteriophora Hba_18605 I
L596_g998 Steinernema carpocapsae L596_g998 I