CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00017p00119990
(
Amborella trichopoda
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AMTR_s00017p00119990
T291972_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.945
0.842
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.935
0.816
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.935
0.816
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN
NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.904
0.798
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG
CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.904
0.798
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG
CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.904
0.798
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.882
0.754
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.882
0.754
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN08567
NAC/NAM
9
137
PPGFRFHPTEEELVGYYLTKKITSQQIDLDIIRDIDLYRIEPWDLHERCGNLYEEQKEWYFFSYKDRKYPTGTRTNRATLAGFWKATGRDKTIFSKGNKVIGMRKTLVFYQGRAPNGRKSDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Amborella trichopoda
TFs
233 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NAC007
Arabidopsis thaliana
AT1G12260
D
0.882
NAC037
Arabidopsis thaliana
AT2G18060
D
0.945
ANAC076
Arabidopsis thaliana
AT4G36160
D
0.935
NAC105
Arabidopsis thaliana
AT5G66300
D
0.904
VND1
Arabidopsis lyrata
Al_scaffold_0003_3772
I
0.944
AMTR_s00011p00251570
Amborella trichopoda
AMTR_s00011p00251570
I
0.894
BGIOSGA011539
Oryza indica
BGIOSGA011539
I
0.939
BGIOSGA022108
Oryza indica
BGIOSGA022108
I
0.873
BGIOSGA033343
Oryza indica
BGIOSGA033343
I
0.938
Bo1g005810
Brassica oleracea
Bo1g005810
I
0.938
Bo2g075130
Brassica oleracea
Bo2g075130
I
0.894
Bo3g093950
Brassica oleracea
Bo3g093950
I
0.942
Bo5g017120
Brassica oleracea
Bo5g017120
I
0.874
Bo7g011640
Brassica oleracea
Bo7g011640
I
0.946
Bo7g065010
Brassica oleracea
Bo7g065010
I
0.919
Bo7g117820
Brassica oleracea
Bo7g117820
I
0.941
Bo8g062650
Brassica oleracea
Bo8g062650
I
0.882
Bo8g108300
Brassica oleracea
Bo8g108300
I
0.881
Bra007996
Brassica rapa
Bra007996
I
0.901
Bra011667
Brassica rapa
Bra011667
I
0.938
Bra012065
Brassica rapa
Bra012065
I
0.919
Bra016783
Brassica rapa
Bra016783
I
0.882
Bra017750
Brassica rapa
Bra017750
I
0.941
Bra019750
Brassica rapa
Bra019750
I
0.873
Bra026981
Brassica rapa
Bra026981
I
0.881
Bra039915
Brassica rapa
Bra039915
I
0.931
F775_20020
Aegilops tauschii
F775_20020
I
0.937
VND4
Arabidopsis lyrata
fgenesh2_kg.1__1330__AT1G12260.1
I
0.882
ANAC076
Arabidopsis lyrata
fgenesh2_kg.7__450__AT4G36160.1
I
0.941
ANAC105
Arabidopsis lyrata
fgenesh2_kg.8__2792__AT5G66300.1
I
0.919
GLYMA01G37310
Glycine max
GLYMA01G37310
I
0.921
GLYMA02G05620
Glycine max
GLYMA02G05620
I
0.912
GLYMA06G47680
Glycine max
GLYMA06G47680
I
0.875
GLYMA09G36600
Glycine max
GLYMA09G36600
I
0.885
GLYMA11G07990
Glycine max
GLYMA11G07990
I
0.921
GLYMA12G00760
Glycine max
GLYMA12G00760
I
0.878
GLYMA16G24200
Glycine max
GLYMA16G24200
I
0.915
GLYMA20G31551
Glycine max
GLYMA20G31551
I
0.872
GRMZM2G025642
Zea mays
GRMZM2G025642
I
0.926
GRMZM2G315140
Zea mays
GRMZM2G315140
I
0.871
GSMUA_Achr10G14400_001
Musa acuminata
GSMUA_Achr10G14400_001
I
0.878
GSMUA_Achr11G03040_001
Musa acuminata
GSMUA_Achr11G03040_001
I
0.945
GSMUA_Achr11G03780_001
Musa acuminata
GSMUA_Achr11G03780_001
I
0.881
GSMUA_Achr11G17510_001
Musa acuminata
GSMUA_Achr11G17510_001
I
0.883
GSMUA_Achr7G06640_001
Musa acuminata
GSMUA_Achr7G06640_001
I
0.872
GSMUA_Achr8G11590_001
Musa acuminata
GSMUA_Achr8G11590_001
I
0.871
GSMUA_Achr8G12100_001
Musa acuminata
GSMUA_Achr8G12100_001
I
0.945
LPERR02G21010
Leersia perrieri
LPERR02G21010
I
0.871
LPERR03G01990
Leersia perrieri
LPERR03G01990
I
0.939
MLOC_56103
Hordeum vulgare
MLOC_56103
I
0.873
MLOC_56769
Hordeum vulgare
MLOC_56769
I
0.937
MTR_1g096430
Medicago truncatula
MTR_1g096430
I
0.876
MTR_4g036030
Medicago truncatula
MTR_4g036030
I
0.887
MTR_5g012080
Medicago truncatula
MTR_5g012080
I
0.877
MTR_5g021710
Medicago truncatula
MTR_5g021710
I
0.924
OB02G33070
Oryza brachyantha
OB02G33070
I
0.871
OB03G12100
Oryza brachyantha
OB03G12100
I
0.939
OB06G10310
Oryza brachyantha
OB06G10310
I
0.873
OB10G23740
Oryza brachyantha
OB10G23740
I
0.938
OBART02G25700
Oryza barthii
OBART02G25700
I
0.871
OBART03G02180
Oryza barthii
OBART03G02180
I
0.939
OBART06G00240
Oryza barthii
OBART06G00240
I
0.873
OBART10G16620
Oryza barthii
OBART10G16620
I
0.928
OGLUM02G26220
Oryza glumaepatula
OGLUM02G26220
I
0.871
OGLUM03G02130
Oryza glumaepatula
OGLUM03G02130
I
0.939
OGLUM06G00210
Oryza glumaepatula
OGLUM06G00210
I
0.873
OGLUM10G16690
Oryza glumaepatula
OGLUM10G16690
I
0.928
OLONG_011521
Oryza longistaminata
OLONG_011521
I
0.939
OLONG_016152
Oryza longistaminata
OLONG_016152
I
0.932
OMERI02G25220
Oryza meridionalis
OMERI02G25220
I
0.871
OMERI03G02020
Oryza meridionalis
OMERI03G02020
I
0.939
OMERI06G00230
Oryza meridionalis
OMERI06G00230
I
0.873
OMERI10G13220
Oryza meridionalis
OMERI10G13220
I
0.932
ONIVA02G28150
Oryza nivara
ONIVA02G28150
I
0.871
ONIVA03G01790
Oryza nivara
ONIVA03G01790
I
0.939
ONIVA06G00260
Oryza nivara
ONIVA06G00260
I
0.873
ONIVA10G18400
Oryza nivara
ONIVA10G18400
I
0.928
OPUNC03G01920
Oryza punctata
OPUNC03G01920
I
0.939
OPUNC06G00220
Oryza punctata
OPUNC06G00220
I
0.873
OPUNC10G15070
Oryza punctata
OPUNC10G15070
I
0.899
ORGLA03G0019500
Oryza glaberrima
ORGLA03G0019500
I
0.939
ORGLA06G0002300
Oryza glaberrima
ORGLA06G0002300
I
0.873
ORUFI02G27110
Oryza rufipogon
ORUFI02G27110
I
0.871
ORUFI03G01920
Oryza rufipogon
ORUFI03G01920
I
0.939
ORUFI06G00250
Oryza rufipogon
ORUFI06G00250
I
0.873
ORUFI10G17730
Oryza rufipogon
ORUFI10G17730
I
0.928
OS02G0643600
Oryza sativa
OS02G0643600
I
0.871
OS06G0104200
Oryza sativa
OS06G0104200
I
0.873
OS10G0532000
Oryza sativa
OS10G0532000
I
0.938
PGSC0003DMG400000887
Solanum tuberosum
PGSC0003DMG400000887
I
0.890
PGSC0003DMG400021576
Solanum tuberosum
PGSC0003DMG400021576
I
0.877
PGSC0003DMG400026079
Solanum tuberosum
PGSC0003DMG400026079
I
0.929
PGSC0003DMG401003552
Solanum tuberosum
PGSC0003DMG401003552
I
0.944
POPTR_0001s00220
Populus trichocarpa
POPTR_0001s00220
I
0.878
POPTR_0003s11250
Populus trichocarpa
POPTR_0003s11250
I
0.878
POPTR_0005s11870
Populus trichocarpa
POPTR_0005s11870
I
0.947
POPTR_0007s13910
Populus trichocarpa
POPTR_0007s13910
I
0.925
POPTR_0013s11740
Populus trichocarpa
POPTR_0013s11740
I
0.907
POPTR_0015s14770
Populus trichocarpa
POPTR_0015s14770
I
0.876
POPTR_0019s11330
Populus trichocarpa
POPTR_0019s11330
I
0.878
PRUPE_ppa015786mg
Prunus persica
PRUPE_ppa015786mg
I
0.871
PRUPE_ppa016236mg
Prunus persica
PRUPE_ppa016236mg
I
0.911
PRUPE_ppa020139mg
Prunus persica
PRUPE_ppa020139mg
I
0.875
PRUPE_ppa022264mg
Prunus persica
PRUPE_ppa022264mg
I
0.949
Sb01g030760
Sorghum bicolor
Sb01g030760
I
0.930
Sb01g048730
Sorghum bicolor
Sb01g048730
I
0.939
Sb10g000460
Sorghum bicolor
Sb10g000460
I
0.872
SELMODRAFT_100973
Selaginella moellendorffii
SELMODRAFT_100973
I
0.896
SELMODRAFT_71405
Selaginella moellendorffii
SELMODRAFT_71405
I
0.896
Si017679m.g
Setaria italica
Si017679m.g
I
0.871
Si036363m.g
Setaria italica
Si036363m.g
I
0.939
Si039467m.g
Setaria italica
Si039467m.g
I
0.941
Solyc02g084350.2
Solanum lycopersicum
Solyc02g084350.2
I
0.944
Solyc06g034340.1
Solanum lycopersicum
Solyc06g034340.1
I
0.877
Solyc06g065410.2
Solanum lycopersicum
Solyc06g065410.2
I
0.929
Solyc11g018660.1
Solanum lycopersicum
Solyc11g018660.1
I
0.919
TCM_000235
Theobroma cacao
TCM_000235
I
0.947
TCM_014939
Theobroma cacao
TCM_014939
I
0.880
TCM_016035
Theobroma cacao
TCM_016035
I
0.878
TCM_036364
Theobroma cacao
TCM_036364
I
0.920
Traes_4BL_03B8EA3BF
Triticum aestivum
Traes_4BL_03B8EA3BF
I
0.937
Traes_4DL_54E14ABCB
Triticum aestivum
Traes_4DL_54E14ABCB
I
0.937
Traes_5AL_DD30903BD
Triticum aestivum
Traes_5AL_DD30903BD
I
0.897
VIT_02s0154g00020
Vitis vinifera
VIT_02s0154g00020
I
0.878
ANAC076
Vitis vinifera
VIT_04s0023g03110
I
0.947
VIT_16s0022g00690
Vitis vinifera
VIT_16s0022g00690
I
0.875
Ca_01981
Cicer arietinum
Ca_01981
I
0.921
Ca_04309
Cicer arietinum
Ca_04309
I
0.871
Cla006372
Citrullus lanatus
Cla006372
I
0.875
Cla014492
Citrullus lanatus
Cla014492
I
0.931
Cla016604
Citrullus lanatus
Cla016604
I
0.920
Pm019488
Prunus mume
Pm019488
I
0.875
Pm019490
Prunus mume
Pm019490
I
0.875
Pm022184
Prunus mume
Pm022184
I
0.911
Pm023559
Prunus mume
Pm023559
I
0.871
Pm026735
Prunus mume
Pm026735
I
0.949
28200.m000189
Ricinus communis
28200.m000189
I
0.878
28623.m000400
Ricinus communis
28623.m000400
I
0.944
29728.m000815
Ricinus communis
29728.m000815
I
0.912
30147.m014211
Ricinus communis
30147.m014211
I
0.874
cassava24947.valid.m1
Manihot esculenta
cassava24947.valid.m1
I
0.947
cassava25360.m1
Manihot esculenta
cassava25360.m1
I
0.920
cassava26615.m1
Manihot esculenta
cassava26615.m1
I
0.944
cassava40790.m1
Manihot esculenta
cassava40790.m1
I
0.907
cassava46384.m1
Manihot esculenta
cassava46384.m1
I
0.880
cassava47039.m1
Manihot esculenta
cassava47039.m1
I
0.873
Cucsa.043420
Cucumis sativus
Cucsa.043420
I
0.942
Cucsa.240650
Cucumis sativus
Cucsa.240650
I
0.914
Cucsa.251620
Cucumis sativus
Cucsa.251620
I
0.875
Cucsa.302120
Cucumis sativus
Cucsa.302120
I
0.881
mgf009391m
Mimulus guttatus
mgf009391m
I
0.925
mgf020336m
Mimulus guttatus
mgf020336m
I
0.871
mgf021916m
Mimulus guttatus
mgf021916m
I
0.875
mgf022574m
Mimulus guttatus
mgf022574m
I
0.947
mgf026153m
Mimulus guttatus
mgf026153m
I
0.872
Aquca_006_00155
Aquilegia coerulea
Aquca_006_00155
I
0.940
Aquca_007_00369
Aquilegia coerulea
Aquca_007_00369
I
0.906
Aquca_013_00692
Aquilegia coerulea
Aquca_013_00692
I
0.890
Bostr.0568s0042
Boechera stricta
Bostr.0568s0042
I
0.919
Bostr.13671s0233
Boechera stricta
Bostr.13671s0233
I
0.882
Bostr.18351s0273
Boechera stricta
Bostr.18351s0273
I
0.952
Bostr.7867s1483
Boechera stricta
Bostr.7867s1483
I
0.936
Cagra.0568s0135
Capsella grandiflora
Cagra.0568s0135
I
0.882
Cagra.10427s0040
Capsella grandiflora
Cagra.10427s0040
I
0.919
Cagra.4734s0006
Capsella grandiflora
Cagra.4734s0006
I
0.941
Carubv10004997m.g
Capsella rubella
Carubv10004997m.g
I
0.941
Carubv10009366m.g
Capsella rubella
Carubv10009366m.g
I
0.882
Carubv10026898m.g
Capsella rubella
Carubv10026898m.g
I
0.919
Ciclev10003255m.g
Citrus clementina
Ciclev10003255m.g
I
0.922
Ciclev10006988m.g
Citrus clementina
Ciclev10006988m.g
I
0.880
Ciclev10024218m.g
Citrus clementina
Ciclev10024218m.g
I
0.878
Ciclev10026114m.g
Citrus clementina
Ciclev10026114m.g
I
0.947
Eucgr.A02887
Eucalyptus grandis
Eucgr.A02887
I
0.880
Eucgr.F02615
Eucalyptus grandis
Eucgr.F02615
I
0.879
Eucgr.I02366
Eucalyptus grandis
Eucgr.I02366
I
0.947
evm.TU.contig_30558
Carica papaya
evm.TU.contig_30558
I
0.916
evm.TU.supercontig_29.118
Carica papaya
evm.TU.supercontig_29.118
I
0.878
evm.TU.supercontig_3.311
Carica papaya
evm.TU.supercontig_3.311
I
0.884
evm.TU.supercontig_6.226
Carica papaya
evm.TU.supercontig_6.226
I
0.947
gene14869-v1.0-hybrid
Fragaria vesca
gene14869-v1.0-hybrid
I
0.947
gene21248-v1.0-hybrid
Fragaria vesca
gene21248-v1.0-hybrid
I
0.872
gene32254-v1.0-hybrid
Fragaria vesca
gene32254-v1.0-hybrid
I
0.883
Gorai.001G048200
Gossypium raimondii
Gorai.001G048200
I
0.880
Gorai.003G010700
Gossypium raimondii
Gorai.003G010700
I
0.936
Gorai.003G114100
Gossypium raimondii
Gorai.003G114100
I
0.875
Gorai.003G169000
Gossypium raimondii
Gorai.003G169000
I
0.876
Gorai.007G048000
Gossypium raimondii
Gorai.007G048000
I
0.876
Gorai.007G196400
Gossypium raimondii
Gorai.007G196400
I
0.947
Gorai.008G063600
Gossypium raimondii
Gorai.008G063600
I
0.944
Gorai.008G236400
Gossypium raimondii
Gorai.008G236400
I
0.871
Lus10017915.g
Linum usitatissimum
Lus10017915.g
I
0.924
Lus10024601.g
Linum usitatissimum
Lus10024601.g
I
0.882
Lus10028372.g
Linum usitatissimum
Lus10028372.g
I
0.948
Lus10031142.g
Linum usitatissimum
Lus10031142.g
I
0.888
Lus10031721.g
Linum usitatissimum
Lus10031721.g
I
0.888
Lus10032238.g
Linum usitatissimum
Lus10032238.g
I
0.889
Lus10041822.g
Linum usitatissimum
Lus10041822.g
I
0.948
MDP0000136180
Malus domestica
MDP0000136180
I
0.949
MDP0000176447
Malus domestica
MDP0000176447
I
0.949
MDP0000298965
Malus domestica
MDP0000298965
I
0.949
MDP0000299959
Malus domestica
MDP0000299959
I
0.949
MDP0000849944
Malus domestica
MDP0000849944
I
0.912
MDP0000902822
Malus domestica
MDP0000902822
I
0.901
orange1.1g018596m.g
Citrus sinensis
orange1.1g018596m.g
I
0.880
orange1.1g019821m.g
Citrus sinensis
orange1.1g019821m.g
I
0.922
orange1.1g020354m.g
Citrus sinensis
orange1.1g020354m.g
I
0.878
orange1.1g021187m.g
Citrus sinensis
orange1.1g021187m.g
I
0.947
Pavir.Da02426
Panicum virgatum
Pavir.Da02426
I
0.872
Pavir.Ia02924
Panicum virgatum
Pavir.Ia02924
I
0.941
Pavir.Ib00161
Panicum virgatum
Pavir.Ib00161
I
0.939
Pavir.Ib02477
Panicum virgatum
Pavir.Ib02477
I
0.941
Pavir.J26987
Panicum virgatum
Pavir.J26987
I
0.872
Pavir.J32898
Panicum virgatum
Pavir.J32898
I
0.937
Pavir.J39804
Panicum virgatum
Pavir.J39804
I
0.871
SapurV1A.0166s0460
Salix purpurea
SapurV1A.0166s0460
I
0.949
SapurV1A.0179s0040
Salix purpurea
SapurV1A.0179s0040
I
0.911
SapurV1A.0287s0280
Salix purpurea
SapurV1A.0287s0280
I
0.881
SapurV1A.0287s0290
Salix purpurea
SapurV1A.0287s0290
I
0.881
SapurV1A.0487s0230
Salix purpurea
SapurV1A.0487s0230
I
0.947
SapurV1A.0634s0120
Salix purpurea
SapurV1A.0634s0120
I
0.882
SapurV1A.1275s0070
Salix purpurea
SapurV1A.1275s0070
I
0.878
SapurV1A.1801s0020
Salix purpurea
SapurV1A.1801s0020
I
0.881
SapurV1A.2633s0010
Salix purpurea
SapurV1A.2633s0010
I
0.881
SapurV1A.3982s0010
Salix purpurea
SapurV1A.3982s0010
I
0.949
Thhalv10005380m.g
Eutrema salsugineum
Thhalv10005380m.g
I
0.878
Thhalv10007823m.g
Eutrema salsugineum
Thhalv10007823m.g
I
0.882
Thhalv10022756m.g
Eutrema salsugineum
Thhalv10022756m.g
I
0.944
Thhalv10025510m.g
Eutrema salsugineum
Thhalv10025510m.g
I
0.935
PK11173.1
Cannabis sativa
PK11173.1
I
0.944
PK23416.1
Cannabis sativa
PK23416.1
I
0.882
PK28510.1
Cannabis sativa
PK28510.1
I
0.881
PDK_20s1306451g001
Phoenix dactylifera
PDK_20s1306451g001
I
0.947
PDK_20s1503311g001
Phoenix dactylifera
PDK_20s1503311g001
I
0.926