Bo5g133050 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g133050 T292417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G12910
M07204_2.00 		Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR		 Dap-seq
OMalley et al.(2016)
AT3G12910_col_a 		0.990 0.887
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.904 0.548
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.904 0.548
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.904 0.548
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.902 0.539
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g133050.1 NAC/NAM 25 222

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC002 Arabidopsis thaliana AT1G01720 D 0.904
AT3G12910 Arabidopsis thaliana AT3G12910 D 0.990
NAC48 Oryza sativa OS01G0884300 D 0.902
NAC026 Arabidopsis thaliana AT1G62700 I 0.894
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.902
BGIOSGA014034 Oryza indica BGIOSGA014034 I 0.892
BGIOSGA018048 Oryza indica BGIOSGA018048 I 0.893
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.901
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.891
Bo1g138800 Brassica oleracea Bo1g138800 I 0.989
Bo3g065200 Brassica oleracea Bo3g065200 I 0.979
Bo5g001100 Brassica oleracea Bo5g001100 I 0.904
Bra033239 Brassica rapa Bra033239 I 0.904
Bra034719 Brassica rapa Bra034719 I 0.986
Bra039353 Brassica rapa Bra039353 I 0.989
BRADI2G03467 Brachypodium distachyon BRADI2G03467 I 0.899
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.897
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.893
F775_13961 Aegilops tauschii F775_13961 I 0.886
F775_28813 Aegilops tauschii F775_28813 I 0.897
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.990
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.898
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.906
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.901
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.925
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.905
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.904
GRMZM2G475014 Zea mays GRMZM2G475014 I 0.955
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.962
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.909
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.963
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.891
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.953
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.920
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.878
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.962
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.902
LPERR04G17350 Leersia perrieri LPERR04G17350 I 0.915
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.890
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.889
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.894
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.886
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.902
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.960
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.958
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.898
OB01G48340 Oryza brachyantha OB01G48340 I 0.902
OB05G24820 Oryza brachyantha OB05G24820 I 0.898
OB09G25590 Oryza brachyantha OB09G25590 I 0.891
OBART01G39590 Oryza barthii OBART01G39590 I 0.902
OBART05G16540 Oryza barthii OBART05G16540 I 0.893
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.902
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I 0.892
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I 0.893
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.901
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.891
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.902
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.894
OMERI05G14410 Oryza meridionalis OMERI05G14410 I 0.876
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.891
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.902
ONIVA04G29890 Oryza nivara ONIVA04G29890 I 0.892
ONIVA05G17220 Oryza nivara ONIVA05G17220 I 0.893
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.901
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.891
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.902
OPUNC04G28220 Oryza punctata OPUNC04G28220 I 0.894
OPUNC05G14600 Oryza punctata OPUNC05G14600 I 0.893
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.902
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I 0.892
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I 0.893
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.901
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.891
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.902
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I 0.892
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I 0.893
OS04G0691300 Oryza sativa OS04G0691300 I 0.892
OS05G0415400 Oryza sativa OS05G0415400 I 0.893
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I 0.875
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.974
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.958
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.891
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.891
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.884
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.887
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.905
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.894
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.901
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.960
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.906
Si002413m.g Setaria italica Si002413m.g I 0.901
Si022714m.g Setaria italica Si022714m.g I 0.956
Si022723m.g Setaria italica Si022723m.g I 0.921
Si030752m.g Setaria italica Si030752m.g I 0.899
Si032702m.g Setaria italica Si032702m.g I 0.894
Si036303m.g Setaria italica Si036303m.g I 0.923
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.900
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.897
TCM_029321 Theobroma cacao TCM_029321 I 0.960
TCM_035160 Theobroma cacao TCM_035160 I 0.906
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.897
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.886
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.886
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.886
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.897
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.918
anac032 Vitis vinifera VIT_18s0001g02300 I 0.908
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.969
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.971
Ca_13571 Cicer arietinum Ca_13571 I 0.943
Cla011742 Citrullus lanatus Cla011742 I 0.881
Cla023594 Citrullus lanatus Cla023594 I 0.972
cassava27052.m1 Manihot esculenta cassava27052.m1 I 0.874
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.906
cassava39074.m1 Manihot esculenta cassava39074.m1 I 0.950
Cucsa.058780 Cucumis sativus Cucsa.058780 I 0.942
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.915
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.912
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.910
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.918
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.911
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.930
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.901
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.900
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.899
mgf004020m Mimulus guttatus mgf004020m I 0.882
mgf013201m Mimulus guttatus mgf013201m I 0.919
mgf015836m Mimulus guttatus mgf015836m I 0.873
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.913
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.987
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.904
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.904
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.989
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.904
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.989
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.978
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.890
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.890
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.925
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.906
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.955
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I 0.962
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.894
Pavir.Ba02443 Panicum virgatum Pavir.Ba02443 I 0.934
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I 0.900
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I 0.900
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.894
Pavir.Cb00167 Panicum virgatum Pavir.Cb00167 I 0.956
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.918
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.925
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.924
Pavir.J31204 Panicum virgatum Pavir.J31204 I 0.951
SapurV1A.0039s0530 Salix purpurea SapurV1A.0039s0530 I 0.876
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.959
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.972
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.927
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.891
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.909
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.911
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.888
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.912
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.887
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.990
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.894
PK26157.1 Cannabis sativa PK26157.1 I 0.907
OPUNC04G19000 Oryza punctata OPUNC04G19000 N 0.913