Cucsa.058780 (Cucumis sativus)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cucsa.058780 T296948_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G12910
M07204_2.00 		Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR		 Dap-seq
OMalley et al.(2016)
AT3G12910_col_a 		0.963 0.760
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.925 0.635
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.923 0.644
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.923 0.644
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.923 0.644
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.058780.1 NAC/NAM 15 140

Links

Other NAC/NAM family TFs
Other Cucumis sativus TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla023594 Citrullus lanatus Cla023594 I 0.986
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.977
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.974
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.972
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.972
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.969
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.966
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.966
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.966
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.964
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.964
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.964
AT3G12910 Arabidopsis thaliana AT3G12910 D 0.963
Bo1g138800 Brassica oleracea Bo1g138800 I 0.962
Bra039353 Brassica rapa Bra039353 I 0.962
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.957
cassava39074.m1 Manihot esculenta cassava39074.m1 I 0.957
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.956
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.953
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.952
Bra034719 Brassica rapa Bra034719 I 0.951
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.951
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I 0.949
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.947
Bo3g065200 Brassica oleracea Bo3g065200 I 0.945
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.945
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.944
Bo5g133050 Brassica oleracea Bo5g133050 I 0.942
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.938
Ca_13571 Cicer arietinum Ca_13571 I 0.938
TCM_029321 Theobroma cacao TCM_029321 I 0.936
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.935
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.932
Si022714m.g Setaria italica Si022714m.g I 0.931
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.930
F775_28813 Aegilops tauschii F775_28813 I 0.929
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.929
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.929
mgf013201m Mimulus guttatus mgf013201m I 0.929
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.928
PK26157.1 Cannabis sativa PK26157.1 I 0.928
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.927
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.925
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.925
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.925
OB01G48340 Oryza brachyantha OB01G48340 I 0.925
OBART01G39590 Oryza barthii OBART01G39590 I 0.925
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.925
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.925
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.925
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.925
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.925
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.925
NAC48 Oryza sativa OS01G0884300 D 0.925
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.925
Si002413m.g Setaria italica Si002413m.g I 0.925
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.925
TCM_035160 Theobroma cacao TCM_035160 I 0.925
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.925
NAC002 Arabidopsis thaliana AT1G01720 D 0.923
Bo5g001100 Brassica oleracea Bo5g001100 I 0.923
Bra033239 Brassica rapa Bra033239 I 0.923
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.923
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.923
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.923
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.923
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.923
Pavir.J31204 Panicum virgatum Pavir.J31204 I 0.922
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.922
OB05G24820 Oryza brachyantha OB05G24820 I 0.921
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.921
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.921
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.920
anac032 Vitis vinifera VIT_18s0001g02300 I 0.919
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.918
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.918
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.918
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.918
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.916
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.915
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.915
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.913
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.912
Pavir.Cb00167 Panicum virgatum Pavir.Cb00167 I 0.912
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.907
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.907
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.906
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.904
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.904
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.903
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.903
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.903
GRMZM2G475014 Zea mays GRMZM2G475014 I 0.901
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.901
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.900
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.900
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.899
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.899
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.897
Si036303m.g Setaria italica Si036303m.g I 0.897
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.897
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.896
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.896
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.896
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.896
mgf004020m Mimulus guttatus mgf004020m I 0.894
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I 0.892
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I 0.891
Si030752m.g Setaria italica Si030752m.g I 0.890
Pavir.J04049 Panicum virgatum Pavir.J04049 I 0.890
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.887
mgf002183m Mimulus guttatus mgf002183m I 0.885
Pavir.Ba02443 Panicum virgatum Pavir.Ba02443 I 0.882
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.876
POPTR_0005s10610 Populus trichocarpa POPTR_0005s10610 I 0.874
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.873
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.872
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.871
Si022723m.g Setaria italica Si022723m.g I 0.871