Bra021856 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra021856 T292607_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.879 0.741
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.879 0.741
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.879 0.741
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra021856.1-P NAC/NAM 15 135

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POU2F2 Homo sapiens ENSG00000028277 D 0.000
Pou2f2 Mus musculus ENSMUSG00000008496 D 0.000
ceh-18 Caenorhabditis elegans WBGene00000441 D 0.000
Pou3f3 Mus musculus ENSMUSG00000045515 D 0.000
pou3f3b Oryzias latipes ENSORLG00000001901 I 0.000
ENSORLG00000014257 Oryzias latipes ENSORLG00000014257 I 0.000
ENSMLUG00000001011 Myotis lucifugus ENSMLUG00000001011 I 0.000
ENSPPYG00000003972 Pongo abelii ENSPPYG00000003972 I 0.000
POU2F3 Pan troglodytes ENSPTRG00000004391 I 0.000
Sjc_0006200 Schistosoma japonicum Sjc_0006200 I 0.000
POU2F2 Pteropus vampyrus ENSPVAG00000010621 I 0.000
ENSSARG00000008273 Sorex araneus ENSSARG00000008273 I 0.000
pou5f3 Tetraodon nigroviridis ENSTNIG00000003465 I 0.000
ENSTSYG00000009143 Tarsius syrichta ENSTSYG00000009143 I 0.000
ENSVPAG00000010276 Vicugna pacos ENSVPAG00000010276 I 0.000
ENSXMAG00000019380 Xiphophorus maculatus ENSXMAG00000019380 I 0.000
CAA36119 Xenopus laevis CAA36119 I 0.000
ENSGMOG00000000005 Gadus morhua ENSGMOG00000000005 I 0.000
CJA14215 Caenorhabditis japonica CJA14215 I 0.000
SNAPOd2T00011770001 Oikopleura dioica SNAPOd2T00011770001 I 0.000
AMAM009299 Anopheles maculatus AMAM009299 I 0.000
D918_02683 Trichuris suis D918_02683 I 0.000
genemark-nMf.1.1.scaf22092-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf22092-processed-gene-0.1 I 0.000
GPUH_0000960301 Gongylonema pulchrum GPUH_0000960301 I 0.000
GPUH_0002653201 Gongylonema pulchrum GPUH_0002653201 I 0.000
L596_g16531 Steinernema carpocapsae L596_g16531 I 0.000
L889_g16900 Steinernema feltiae L889_g16900 I 0.000
L892_g6561 Steinernema scapterisci L892_g6561 I 0.000
L898_g22690 Steinernema monticolum L898_g22690 I 0.000
OESDEN_22180 Oesophagostomum dentatum OESDEN_22180 I 0.000
SBAD_0000845701 Soboliphyme baturini SBAD_0000845701 I 0.000
TELCIR_24859 Teladorsagia circumcincta TELCIR_24859 I 0.000
TTRE_0000958901 Trichuris trichiura TTRE_0000958901 I 0.000
POU2F2 Oryctolagus cuniculus ENSOCUG00000021776 I 0.000
POU2F2 Canis familiaris ENSCAFG00000004911 I 0.000
ENSCHOG00000005106 Choloepus hoffmanni ENSCHOG00000005106 I 0.000
POU2F2 Callithrix jacchus ENSCJAG00000012753 I 0.000
ENSCSAG00000003479 Chlorocebus sabaeus ENSCSAG00000003479 I 0.000
POU2F2 Equus caballus ENSECAG00000004906 I 0.000
POU2F2 Echinops telfairi ENSETEG00000009259 I 0.000
POU2F2 Gorilla gorilla ENSGGOG00000011088 I 0.000
POU2F2 Loxodonta africana ENSLAFG00000009508 I 0.000
ENSMEUG00000016676 Macropus eugenii ENSMEUG00000016676 I 0.000
POU2F2 Microcebus murinus ENSMICG00000015156 I 0.000
POU2F2 Macaca mulatta ENSMMUG00000013376 I 0.000
ENSDORG00000005303 Dipodomys ordii ENSDORG00000005303 I 0.000
ENSPANG00000008094 Papio anubis ENSPANG00000008094 I 0.000
ENSSTOG00000021390 Ictidomys tridecemlineatus ENSSTOG00000021390 I 0.000
ENSAMEG00000004811 Ailuropoda melanoleuca ENSAMEG00000004811 I 0.000
L893_g4672 Steinernema glaseri L893_g4672 I 0.000
Myotis_brandtii_POU2F2_10007123 Myotis brandtii Myotis_brandtii_POU2F2_10007123 I 0.000
ENSMMUP00000031584 Macaca fascicularis ENSMMUP00000031584 I 0.000
ENSBTAP00000011279-D1 Bos grunniens ENSBTAP00000011279-D1 I 0.000
POU2F2 Tursiops truncatus ENSTTRG00000008331 I 0.000
POU2F2 Procavia capensis ENSPCAG00000008356 I 0.000
ENSSHAG00000009106 Sarcophilus harrisii ENSSHAG00000009106 I 0.000
Pou2f2 Rattus norvegicus ENSRNOG00000055650 I 0.000
POU2F2 Pan troglodytes ENSPTRG00000011045 I 0.000
ENSPPYG00000010036 Pongo abelii ENSPPYG00000010036 I 0.000
ENSFCAG00000012731 Felis catus ENSFCAG00000012731 N 0.000
ENSSARG00000004678 Sorex araneus ENSSARG00000004678 N 0.000
POU2F2 Myotis lucifugus ENSMLUG00000014682 N 0.000
POU2F2 Cavia porcellus ENSCPOG00000000781 N 0.000
ENSMPUG00000007374 Mustela putorius furo ENSMPUG00000007374 N 0.000