Bra034719 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra034719 T292680_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G12910
M07204_2.00 		Arabidopsis thaliana
YGSCGKNDNDDHNMCGB
VCGKNDHHNHNMCGSCR		 Dap-seq
OMalley et al.(2016)
AT3G12910_col_a 		0.990 0.852
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.940 0.565
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.940 0.565
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.940 0.565
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.933 0.548
NAC101
M07241_2.00 		Arabidopsis thaliana
TGCKTVNDNHNYAMG
CKTRNDNHNBAMGCA		 Dap-seq
OMalley et al.(2016)
VND6_colamp_a 		0.906 0.530
NAC101
M07242_2.00 		Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN
NDWDRCKTRNNNHDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND6_col_v31 		0.906 0.530
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034719.1-P NAC/NAM 25 172

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cbt Drosophila melanogaster FBgn0043364 D 0.000
ACUA013995 Anopheles culicifacies ACUA013995 I 0.000
PHUM248360 Pediculus humanus PHUM248360 I 0.000
SINV19724 Solenopsis invicta SINV19724 I 0.000
Smp_172460 Schistosoma mansoni Smp_172460 I 0.000
tetur19g01530 Tetranychus urticae tetur19g01530 I 0.000
YQE_06283 Dendroctonus ponderosae YQE_06283 I 0.000
LCUP009846 Lucilia cuprina LCUP009846 I 0.000
SMU15001129 Schmidtea mediterranea SMU15001129 I 0.000
XP_002161066.1 Hydra magnipapillata XP_002161066.1 I 0.000
AALB000668 Anopheles albimanus AALB000668 I 0.000
AARA003888 Anopheles arabiensis AARA003888 I 0.000
AATE015094 Anopheles atroparvus AATE015094 I 0.000
ACOM026746 Anopheles coluzzii ACOM026746 I 0.000
AAEL006609 Aedes aegypti AAEL006609 I 0.000
AFAF014334 Anopheles farauti AFAF014334 I 0.000
AFUN003293 Anopheles funestus AFUN003293 I 0.000
AMAM002233 Anopheles maculatus AMAM002233 I 0.000
AMEM009801 Anopheles merus AMEM009801 I 0.000
AMIN009608 Anopheles minimus AMIN009608 I 0.000
ASIS021840 Anopheles sinensis ASIS021840 I 0.000
ASTEI06573 Anopheles stephensi ASTEI06573 I 0.000
MDOA014851 Musca domestica MDOA014851 I 0.000
PPAI003307 Phlebotomus papatasi PPAI003307 I 0.000
A_03560 Schistosoma haematobium A_03560 I 0.000
L798_11067 Zootermopsis nevadensis L798_11067 I 0.000
CpipJ_CPIJ015908 Culex pipiens CpipJ_CPIJ015908 I 0.000
ACEP10867 Atta cephalotes ACEP10867 I 0.000
AGAP009889 Anopheles gambiae AGAP009889 I 0.000
BGIBMGA006120 Bombyx mori BGIBMGA006120 I 0.000
CPIJ015908 Culex quinquefasciatus CPIJ015908 I 0.000
ENSACAG00000012356 Anolis carolinensis ENSACAG00000012356 I 0.000
KLF11 Pteropus vampyrus ENSPVAG00000017463 I 0.000
cbt Drosophila pseudoobscura FBgn0078183 I 0.000
cbt Drosophila ananassae FBgn0101744 I 0.000
cbt Drosophila erecta FBgn0116778 I 0.000
cbt Drosophila grimshawi FBgn0117994 I 0.000
cbt Drosophila mojavensis FBgn0140770 I 0.000
cbt Drosophila persimilis FBgn0156858 I 0.000
cbt Drosophila sechellia FBgn0171577 I 0.000
cbt Drosophila simulans FBgn0194348 I 0.000
cbt Drosophila virilis FBgn0206865 I 0.000
cbt Drosophila willistoni FBgn0226609 I 0.000
cbt Drosophila yakuba FBgn0233632 I 0.000
GB45040 Apis mellifera GB45040 I 0.000
HMEL002401 Heliconius melpomene HMEL002401 I 0.000
KGM_22205 Danaus plexippus KGM_22205 I 0.000
NV23733 Nasonia vitripennis NV23733 I 0.000
HmN_000574300 Hymenolepis microstoma HmN_000574300 N 0.000