CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G17480
(
Brachypodium distachyon
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
BRADI1G17480
T292713_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.906
0.750
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.906
0.750
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G17480.1
NAC/NAM
9
136
PPGFRFHPTDEELILHYLRNRAASAPCPVPIIADVDIYKFDPWDLPCQAVYGEQEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHDPATGGEPVGVKKALVFYKGRPPKGSKTSWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brachypodium distachyon
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LHY
Arabidopsis thaliana
AT1G01060
D
CCA1
Arabidopsis thaliana
AT2G46830
D
RVE8
Arabidopsis thaliana
AT3G09600
D
RVE4
Arabidopsis thaliana
AT5G02840
D
OS08G0157600
Oryza sativa
OS08G0157600
D
PK02532.1
Cannabis sativa
PK02532.1
D
AMTR_s00001p00261430
Amborella trichopoda
AMTR_s00001p00261430
I
AMTR_s00001p00272270
Amborella trichopoda
AMTR_s00001p00272270
I
BGIOSGA002364
Oryza indica
BGIOSGA002364
I
BGIOSGA005842
Oryza indica
BGIOSGA005842
I
BGIOSGA018757
Oryza indica
BGIOSGA018757
I
BGIOSGA020708
Oryza indica
BGIOSGA020708
I
BGIOSGA028019
Oryza indica
BGIOSGA028019
I
Bo1g144410
Brassica oleracea
Bo1g144410
I
Bo3g001090
Brassica oleracea
Bo3g001090
I
Bo3g002070
Brassica oleracea
Bo3g002070
I
Bo4g006930
Brassica oleracea
Bo4g006930
I
Bo5g002430
Brassica oleracea
Bo5g002430
I
Bo5g002760
Brassica oleracea
Bo5g002760
I
Bo5g138190
Brassica oleracea
Bo5g138190
I
Bo9g183320
Brassica oleracea
Bo9g183320
I
Bra004503
Brassica rapa
Bra004503
I
Bra005751
Brassica rapa
Bra005751
I
Bra009562
Brassica rapa
Bra009562
I
Bra029778
Brassica rapa
Bra029778
I
Bra030496
Brassica rapa
Bra030496
I
Bra033257
Brassica rapa
Bra033257
I
Bra033291
Brassica rapa
Bra033291
I
Bra034074
Brassica rapa
Bra034074
I
BRADI1G29680
Brachypodium distachyon
BRADI1G29680
I
BRADI1G32330
Brachypodium distachyon
BRADI1G32330
I
BRADI1G34840
Brachypodium distachyon
BRADI1G34840
I
BRADI3G16515
Brachypodium distachyon
BRADI3G16515
I
BRADI3G51757
Brachypodium distachyon
BRADI3G51757
I
CMK043C
Cyanidioschyzon merolae
CMK043C
I
F775_09103
Aegilops tauschii
F775_09103
I
F775_22242
Aegilops tauschii
F775_22242
I
F775_26024
Aegilops tauschii
F775_26024
I
F775_30481
Aegilops tauschii
F775_30481
I
AN
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1000066
I
LCL1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000163
I
fgenesh2_kg.3__982__AT3G09600.1
Arabidopsis lyrata
fgenesh2_kg.3__982__AT3G09600.1
I
GLYMA03G33440
Glycine max
GLYMA03G33440
I
GLYMA03G42260
Glycine max
GLYMA03G42260
I
GLYMA07G05410
Glycine max
GLYMA07G05410
I
GLYMA07G07200
Glycine max
GLYMA07G07200
I
GLYMA10G05560
Glycine max
GLYMA10G05560
I
GLYMA10G37520
Glycine max
GLYMA10G37520
I
GLYMA13G19910
Glycine max
GLYMA13G19910
I
GLYMA16G01980
Glycine max
GLYMA16G01980
I
GLYMA16G03640
Glycine max
GLYMA16G03640
I
GLYMA19G36170
Glycine max
GLYMA19G36170
I
GLYMA19G45030
Glycine max
GLYMA19G45030
I
GLYMA20G30250
Glycine max
GLYMA20G30250
I
GRMZM2G014902
Zea mays
GRMZM2G014902
I
GRMZM2G029850
Zea mays
GRMZM2G029850
I
GRMZM2G057408
Zea mays
GRMZM2G057408
I
GRMZM2G118693
Zea mays
GRMZM2G118693
I
GRMZM2G170148
Zea mays
GRMZM2G170148
I
GRMZM2G170322
Zea mays
GRMZM2G170322
I
GRMZM2G175265
Zea mays
GRMZM2G175265
I
GSMUA_Achr10G06560_001
Musa acuminata
GSMUA_Achr10G06560_001
I
GSMUA_Achr1G03720_001
Musa acuminata
GSMUA_Achr1G03720_001
I
GSMUA_Achr1G06480_001
Musa acuminata
GSMUA_Achr1G06480_001
I
GSMUA_Achr5G10280_001
Musa acuminata
GSMUA_Achr5G10280_001
I
GSMUA_Achr7G04620_001
Musa acuminata
GSMUA_Achr7G04620_001
I
GSMUA_Achr7G17560_001
Musa acuminata
GSMUA_Achr7G17560_001
I
GSMUA_AchrUn_randomG02340_001
Musa acuminata
GSMUA_AchrUn_randomG02340_001
I
GSMUA_AchrUn_randomG03000_001
Musa acuminata
GSMUA_AchrUn_randomG03000_001
I
LPERR01G03340
Leersia perrieri
LPERR01G03340
I
LPERR02G22740
Leersia perrieri
LPERR02G22740
I
LPERR05G03900
Leersia perrieri
LPERR05G03900
I
LPERR06G20160
Leersia perrieri
LPERR06G20160
I
LPERR08G03480
Leersia perrieri
LPERR08G03480
I
MLOC_14118
Hordeum vulgare
MLOC_14118
I
MLOC_56804
Hordeum vulgare
MLOC_56804
I
MLOC_59912
Hordeum vulgare
MLOC_59912
I
MLOC_68189
Hordeum vulgare
MLOC_68189
I
MTR_0123s0070
Medicago truncatula
MTR_0123s0070
I
MTR_7g118330
Medicago truncatula
MTR_7g118330
I
OB02G35240
Oryza brachyantha
OB02G35240
I
OB05G14050
Oryza brachyantha
OB05G14050
I
OB06G10430
Oryza brachyantha
OB06G10430
I
OB06G32000
Oryza brachyantha
OB06G32000
I
OB08G13700
Oryza brachyantha
OB08G13700
I
OBART01G03720
Oryza barthii
OBART01G03720
I
OBART02G27940
Oryza barthii
OBART02G27940
I
OBART05G04360
Oryza barthii
OBART05G04360
I
OBART05G04370
Oryza barthii
OBART05G04370
I
OBART06G24250
Oryza barthii
OBART06G24250
I
OGLUM01G03980
Oryza glumaepatula
OGLUM01G03980
I
OGLUM02G28500
Oryza glumaepatula
OGLUM02G28500
I
OGLUM05G04280
Oryza glumaepatula
OGLUM05G04280
I
OGLUM06G25500
Oryza glumaepatula
OGLUM06G25500
I
OGLUM08G03510
Oryza glumaepatula
OGLUM08G03510
I
OLONG_000103
Oryza longistaminata
OLONG_000103
I
OMERI01G03530
Oryza meridionalis
OMERI01G03530
I
OMERI02G27110
Oryza meridionalis
OMERI02G27110
I
OMERI05G04320
Oryza meridionalis
OMERI05G04320
I
OMERI06G24490
Oryza meridionalis
OMERI06G24490
I
OMERI08G03470
Oryza meridionalis
OMERI08G03470
I
ONIVA01G04110
Oryza nivara
ONIVA01G04110
I
ONIVA02G31050
Oryza nivara
ONIVA02G31050
I
ONIVA05G04710
Oryza nivara
ONIVA05G04710
I
ONIVA06G30670
Oryza nivara
ONIVA06G30670
I
ONIVA08G03410
Oryza nivara
ONIVA08G03410
I
OPUNC02G25660
Oryza punctata
OPUNC02G25660
I
OPUNC06G21970
Oryza punctata
OPUNC06G21970
I
OPUNC08G03280
Oryza punctata
OPUNC08G03280
I
ORGLA01G0032300
Oryza glaberrima
ORGLA01G0032300
I
ORGLA02G0240100
Oryza glaberrima
ORGLA02G0240100
I
ORGLA06G0204000
Oryza glaberrima
ORGLA06G0204000
I
ORGLA08G0028700
Oryza glaberrima
ORGLA08G0028700
I
ORUFI01G03800
Oryza rufipogon
ORUFI01G03800
I
ORUFI02G29430
Oryza rufipogon
ORUFI02G29430
I
ORUFI05G04560
Oryza rufipogon
ORUFI05G04560
I
ORUFI06G26070
Oryza rufipogon
ORUFI06G26070
I
OS01G0156000
Oryza sativa
OS01G0156000
I
OS02G0680700
Oryza sativa
OS02G0680700
I
OS05G0162800
Oryza sativa
OS05G0162800
I
PGSC0003DMG400000189
Solanum tuberosum
PGSC0003DMG400000189
I
PGSC0003DMG400011048
Solanum tuberosum
PGSC0003DMG400011048
I
PGSC0003DMG400011294
Solanum tuberosum
PGSC0003DMG400011294
I
PGSC0003DMG400025632
Solanum tuberosum
PGSC0003DMG400025632
I
PGSC0003DMG400028896
Solanum tuberosum
PGSC0003DMG400028896
I
POPTR_0002s16460
Populus trichocarpa
POPTR_0002s16460
I
POPTR_0002s18170
Populus trichocarpa
POPTR_0002s18170
I
POPTR_0006s13530
Populus trichocarpa
POPTR_0006s13530
I
POPTR_0014s08520
Populus trichocarpa
POPTR_0014s08520
I
POPTR_0014s10240
Populus trichocarpa
POPTR_0014s10240
I
POPTR_0015s05430
Populus trichocarpa
POPTR_0015s05430
I
POPTR_0016s08470
Populus trichocarpa
POPTR_0016s08470
I
PRUPE_ppa001765mg
Prunus persica
PRUPE_ppa001765mg
I
PRUPE_ppa008029mg
Prunus persica
PRUPE_ppa008029mg
I
Sb03g005480
Sorghum bicolor
Sb03g005480
I
Sb04g031820
Sorghum bicolor
Sb04g031820
I
Sb07g003870
Sorghum bicolor
Sb07g003870
I
CCA1
Arabidopsis lyrata
scaffold_403655.1
I
SELMODRAFT_137893
Selaginella moellendorffii
SELMODRAFT_137893
I
SELMODRAFT_78045
Selaginella moellendorffii
SELMODRAFT_78045
I
Si002704m.g
Setaria italica
Si002704m.g
I
Si006824m.g
Setaria italica
Si006824m.g
I
Si006883m.g
Setaria italica
Si006883m.g
I
Si014685m.g
Setaria italica
Si014685m.g
I
Si017977m.g
Setaria italica
Si017977m.g
I
Solyc01g095030.2
Solanum lycopersicum
Solyc01g095030.2
I
Solyc03g098320.2
Solanum lycopersicum
Solyc03g098320.2
I
Solyc06g036300.2
Solanum lycopersicum
Solyc06g036300.2
I
Solyc10g005080.2
Solanum lycopersicum
Solyc10g005080.2
I
Solyc10g084370.1
Solanum lycopersicum
Solyc10g084370.1
I
TCM_005021
Theobroma cacao
TCM_005021
I
TCM_005269
Theobroma cacao
TCM_005269
I
TCM_015255
Theobroma cacao
TCM_015255
I
TCM_022074
Theobroma cacao
TCM_022074
I
Traes_6AL_362F82EAD
Triticum aestivum
Traes_6AL_362F82EAD
I
Traes_6DL_30F715B53
Triticum aestivum
Traes_6DL_30F715B53
I
Traes_7AL_19F222799
Triticum aestivum
Traes_7AL_19F222799
I
Traes_7BL_998EC9F74
Triticum aestivum
Traes_7BL_998EC9F74
I
Traes_7DL_310E46F15
Triticum aestivum
Traes_7DL_310E46F15
I
Traes_7DL_AB55D9F4E
Triticum aestivum
Traes_7DL_AB55D9F4E
I
TRIUR3_06252
Triticum urartu
TRIUR3_06252
I
TRIUR3_10644
Triticum urartu
TRIUR3_10644
I
TRIUR3_13396
Triticum urartu
TRIUR3_13396
I
VIT_08s0040g03220
Vitis vinifera
VIT_08s0040g03220
I
VIT_15s0046g02260
Vitis vinifera
VIT_15s0046g02260
I
VIT_15s0048g02410
Vitis vinifera
VIT_15s0048g02410
I
VIT_16s0050g01180
Vitis vinifera
VIT_16s0050g01180
I
Cla005022
Citrullus lanatus
Cla005022
I
Cla009284
Citrullus lanatus
Cla009284
I
Cla018126
Citrullus lanatus
Cla018126
I
Cla018914
Citrullus lanatus
Cla018914
I
Cla021528
Citrullus lanatus
Cla021528
I
Pm018226
Prunus mume
Pm018226
I
Pm028731
Prunus mume
Pm028731
I
29805.m001497
Ricinus communis
29805.m001497
I
30076.m004464
Ricinus communis
30076.m004464
I
30169.m006616
Ricinus communis
30169.m006616
I
cassava12928.valid.m1
Manihot esculenta
cassava12928.valid.m1
I
cassava12929.valid.m1
Manihot esculenta
cassava12929.valid.m1
I
cassava18980.valid.m1
Manihot esculenta
cassava18980.valid.m1
I
cassava18981.valid.m1
Manihot esculenta
cassava18981.valid.m1
I
cassava36126.valid.m1
Manihot esculenta
cassava36126.valid.m1
I
cassava36811.valid.m1
Manihot esculenta
cassava36811.valid.m1
I
cassava43542.valid.m1
Manihot esculenta
cassava43542.valid.m1
I
cassava43543.valid.m1
Manihot esculenta
cassava43543.valid.m1
I
cassava43544.valid.m1
Manihot esculenta
cassava43544.valid.m1
I
cassava7251.valid.m1
Manihot esculenta
cassava7251.valid.m1
I
Cucsa.112530
Cucumis sativus
Cucsa.112530
I
Cucsa.192960
Cucumis sativus
Cucsa.192960
I
Cucsa.258660
Cucumis sativus
Cucsa.258660
I
Cucsa.278220
Cucumis sativus
Cucsa.278220
I
Cucsa.307250
Cucumis sativus
Cucsa.307250
I
Cucsa.349800
Cucumis sativus
Cucsa.349800
I
est_orfs.8_8223_4279363:1
Micromonas pusilla
est_orfs.8_8223_4279363:1
I
EuGene.0000110367
Micromonas pusilla
EuGene.0000110367
I
EuGene.0400010070
Ostreococcus RCC809
EuGene.0400010070
I
fgenesh1_pg.scaffold_160000002
Physcomitrella patens
fgenesh1_pg.scaffold_160000002
I
fgenesh1_pg.scaffold_198000070
Physcomitrella patens
fgenesh1_pg.scaffold_198000070
I
gw1.325.30.1
Physcomitrella patens
gw1.325.30.1
I
gw1.46.107.1
Physcomitrella patens
gw1.46.107.1
I
gw1.8.161.1
Volvox carteri
gw1.8.161.1
I
mgf001364m
Mimulus guttatus
mgf001364m
I
mgf012072m
Mimulus guttatus
mgf012072m
I
mgf014004m
Mimulus guttatus
mgf014004m
I
mgf015175m
Mimulus guttatus
mgf015175m
I
mgf021826m
Mimulus guttatus
mgf021826m
I
Aquca_013_00181
Aquilegia coerulea
Aquca_013_00181
I
Bostr.2128s0168
Boechera stricta
Bostr.2128s0168
I
Bostr.22252s0109
Boechera stricta
Bostr.22252s0109
I
Bostr.5325s0026
Boechera stricta
Bostr.5325s0026
I
Bostr.5325s0070
Boechera stricta
Bostr.5325s0070
I
Bostr.7128s0434
Boechera stricta
Bostr.7128s0434
I
Cagra.0050s0017
Capsella grandiflora
Cagra.0050s0017
I
Cagra.0909s0012
Capsella grandiflora
Cagra.0909s0012
I
Cagra.1968s0051
Capsella grandiflora
Cagra.1968s0051
I
Cagra.1968s0093
Capsella grandiflora
Cagra.1968s0093
I
Cagra.2240s0021
Capsella grandiflora
Cagra.2240s0021
I
Carubv10001591m.g
Capsella rubella
Carubv10001591m.g
I
Carubv10008551m.g
Capsella rubella
Carubv10008551m.g
I
Carubv10009624m.g
Capsella rubella
Carubv10009624m.g
I
Carubv10011679m.g
Capsella rubella
Carubv10011679m.g
I
Carubv10014328m.g
Capsella rubella
Carubv10014328m.g
I
Carubv10022831m.g
Capsella rubella
Carubv10022831m.g
I
Ciclev10018964m.g
Citrus clementina
Ciclev10018964m.g
I
Ciclev10020130m.g
Citrus clementina
Ciclev10020130m.g
I
estExt_fgenesh2_pg.C_Chr_080053
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_080053
I
estExt_fgenesh2_pg.C_Chr_110083
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_110083
I
Eucgr.A01184
Eucalyptus grandis
Eucgr.A01184
I
Eucgr.A02733
Eucalyptus grandis
Eucgr.A02733
I
Eucgr.D02320
Eucalyptus grandis
Eucgr.D02320
I
Eucgr.D02651
Eucalyptus grandis
Eucgr.D02651
I
evm.TU.supercontig_1055.1
Carica papaya
evm.TU.supercontig_1055.1
I
evm.TU.supercontig_114.57
Carica papaya
evm.TU.supercontig_114.57
I
evm.TU.supercontig_184.27
Carica papaya
evm.TU.supercontig_184.27
I
gene18104-v1.0-hybrid
Fragaria vesca
gene18104-v1.0-hybrid
I
Genemark1.422_g
Coccomyxa subellipsoidea C169
Genemark1.422_g
I
Gorai.001G069700
Gossypium raimondii
Gorai.001G069700
I
Gorai.004G159700
Gossypium raimondii
Gorai.004G159700
I
Gorai.006G178000
Gossypium raimondii
Gorai.006G178000
I
Gorai.007G013200
Gossypium raimondii
Gorai.007G013200
I
Gorai.007G113900
Gossypium raimondii
Gorai.007G113900
I
Gorai.008G131800
Gossypium raimondii
Gorai.008G131800
I
Gorai.008G132000
Gossypium raimondii
Gorai.008G132000
I
Gorai.008G274500
Gossypium raimondii
Gorai.008G274500
I
Lus10005134.g
Linum usitatissimum
Lus10005134.g
I
Lus10007914.g
Linum usitatissimum
Lus10007914.g
I
Lus10010100.g
Linum usitatissimum
Lus10010100.g
I
Lus10014015.g
Linum usitatissimum
Lus10014015.g
I
Lus10019902.g
Linum usitatissimum
Lus10019902.g
I
Lus10030184.g
Linum usitatissimum
Lus10030184.g
I
Lus10036392.g
Linum usitatissimum
Lus10036392.g
I
orange1.1g004262m.g
Citrus sinensis
orange1.1g004262m.g
I
orange1.1g021851m.g
Citrus sinensis
orange1.1g021851m.g
I
Pavir.Aa00937
Panicum virgatum
Pavir.Aa00937
I
Pavir.Da00204
Panicum virgatum
Pavir.Da00204
I
Pavir.Db00388
Panicum virgatum
Pavir.Db00388
I
Pavir.Fa01905
Panicum virgatum
Pavir.Fa01905
I
Pavir.J34894
Panicum virgatum
Pavir.J34894
I
SapurV1A.0003s0380
Salix purpurea
SapurV1A.0003s0380
I
SapurV1A.0013s1130
Salix purpurea
SapurV1A.0013s1130
I
SapurV1A.0074s0170
Salix purpurea
SapurV1A.0074s0170
I
SapurV1A.0162s0390
Salix purpurea
SapurV1A.0162s0390
I
SapurV1A.0247s0220
Salix purpurea
SapurV1A.0247s0220
I
SapurV1A.0804s0060
Salix purpurea
SapurV1A.0804s0060
I
Thhalv10007028m.g
Eutrema salsugineum
Thhalv10007028m.g
I
Thhalv10008035m.g
Eutrema salsugineum
Thhalv10008035m.g
I
Thhalv10008382m.g
Eutrema salsugineum
Thhalv10008382m.g
I
Thhalv10014025m.g
Eutrema salsugineum
Thhalv10014025m.g
I
Thhalv10021220m.g
Eutrema salsugineum
Thhalv10021220m.g
I
EFA77680.1
Polysphondylium pallidum
EFA77680.1
I
PK06515.1
Cannabis sativa
PK06515.1
I
PK20866.1
Cannabis sativa
PK20866.1
I
chr3.CM0208.410.nd
Lotus japonicus
chr3.CM0208.410.nd
I
fgeneshCV_pg.C_scaffold_1000277
Chlorella vulgaris
fgeneshCV_pg.C_scaffold_1000277
I
LjT02J13.100.nc
Lotus japonicus
LjT02J13.100.nc
I
PDK_20s1414244g001
Phoenix dactylifera
PDK_20s1414244g001
I
Pavir.J28275
Panicum virgatum
Pavir.J28275
N
Pavir.J37379
Panicum virgatum
Pavir.J37379
N
e_gw1.04.00.501.1
Ostreococcus tauri
e_gw1.04.00.501.1
N