Pavir.J28275 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J28275 T289440_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J28275.1.p Myb 54 99

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J37379 Panicum virgatum Pavir.J37379 N 0.868
Si002704m.g Setaria italica Si002704m.g I 0.862
LPERR01G03340 Leersia perrieri LPERR01G03340 I 0.785
e_gw1.04.00.501.1 Ostreococcus tauri e_gw1.04.00.501.1 N 0.779
Sb03g005480 Sorghum bicolor Sb03g005480 I 0.757
BGIOSGA002364 Oryza indica BGIOSGA002364 I 0.745
OBART01G03720 Oryza barthii OBART01G03720 I 0.745
OGLUM01G03980 Oryza glumaepatula OGLUM01G03980 I 0.745
OMERI01G03530 Oryza meridionalis OMERI01G03530 I 0.745
ONIVA01G04110 Oryza nivara ONIVA01G04110 I 0.745
OPUNC01G03310 Oryza punctata OPUNC01G03310 I 0.745
ORGLA01G0032300 Oryza glaberrima ORGLA01G0032300 I 0.745
ORUFI01G03800 Oryza rufipogon ORUFI01G03800 I 0.745
OS01G0156000 Oryza sativa OS01G0156000 I 0.745
BRADI1G34840 Brachypodium distachyon BRADI1G34840 I 0.744
MLOC_59912 Hordeum vulgare MLOC_59912 I 0.719
F775_22242 Aegilops tauschii F775_22242 I 0.706
TRIUR3_06252 Triticum urartu TRIUR3_06252 I 0.706
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.704
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.704
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.684
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.683
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.683
BRADI2G34670 Brachypodium distachyon BRADI2G34670 I 0.680
LPERR05G03900 Leersia perrieri LPERR05G03900 I 0.665