LPERR01G03340 (Leersia perrieri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LPERR01G03340 T273622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.677 0.717
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.677 0.717
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.668 0.717
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.662 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.662 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G03340.1 Myb 35 80

Links

Other Myb/SANT family TFs
Other Leersia perrieri TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI01G03530 Oryza meridionalis OMERI01G03530 I 0.870
OGLUM01G03980 Oryza glumaepatula OGLUM01G03980 I 0.870
ONIVA01G04110 Oryza nivara ONIVA01G04110 I 0.870
ORGLA01G0032300 Oryza glaberrima ORGLA01G0032300 I 0.870
OS01G0156000 Oryza sativa OS01G0156000 I 0.870
ORUFI01G03800 Oryza rufipogon ORUFI01G03800 I 0.870
OBART01G03720 Oryza barthii OBART01G03720 I 0.870
OPUNC01G03310 Oryza punctata OPUNC01G03310 I 0.870
BGIOSGA002364 Oryza indica BGIOSGA002364 I 0.870
Pavir.J37379 Panicum virgatum Pavir.J37379 N 0.826
Sb03g005480 Sorghum bicolor Sb03g005480 I 0.811
Pavir.J28275 Panicum virgatum Pavir.J28275 N 0.785
BRADI1G34840 Brachypodium distachyon BRADI1G34840 I 0.752
Si002704m.g Setaria italica Si002704m.g I 0.738
LPERR05G03900 Leersia perrieri LPERR05G03900 I 0.737
MLOC_59912 Hordeum vulgare MLOC_59912 I 0.727
F775_22242 Aegilops tauschii F775_22242 I 0.714
TRIUR3_06252 Triticum urartu TRIUR3_06252 I 0.714
e_gw1.04.00.501.1 Ostreococcus tauri e_gw1.04.00.501.1 N 0.704
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.697
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.697
ONIVA05G04710 Oryza nivara ONIVA05G04710 I 0.695
BGIOSGA018757 Oryza indica BGIOSGA018757 I 0.695
OS05G0162800 Oryza sativa OS05G0162800 I 0.695
OMERI05G04320 Oryza meridionalis OMERI05G04320 I 0.695
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I 0.695
OBART05G04370 Oryza barthii OBART05G04370 I 0.695
OBART05G04360 Oryza barthii OBART05G04360 I 0.695
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I 0.695
mgf021826m Mimulus guttatus mgf021826m I 0.686
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.677
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.677
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.677
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.677
OB05G14050 Oryza brachyantha OB05G14050 I 0.677
est_orfs.8_8223_4279363:1 Micromonas pusilla est_orfs.8_8223_4279363:1 I 0.677
LHY Arabidopsis thaliana AT1G01060 D 0.677
gw1.8.161.1 Volvox carteri gw1.8.161.1 I 0.669
MLOC_14118 Hordeum vulgare MLOC_14118 I 0.668
TRIUR3_13396 Triticum urartu TRIUR3_13396 I 0.668
LPERR08G03480 Leersia perrieri LPERR08G03480 I 0.668
F775_26024 Aegilops tauschii F775_26024 I 0.668
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I 0.668
GRMZM2G014902 Zea mays GRMZM2G014902 I 0.668
Pavir.J34894 Panicum virgatum Pavir.J34894 I 0.668
GRMZM2G175265 Zea mays GRMZM2G175265 I 0.668
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I 0.668
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I 0.668
Si014685m.g Setaria italica Si014685m.g I 0.668
OPUNC08G03280 Oryza punctata OPUNC08G03280 I 0.668
Bra004503 Brassica rapa Bra004503 I 0.668
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I 0.668
ONIVA08G03410 Oryza nivara ONIVA08G03410 I 0.668
BGIOSGA028019 Oryza indica BGIOSGA028019 I 0.668
Bo4g006930 Brassica oleracea Bo4g006930 I 0.668
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I 0.668
OMERI08G03470 Oryza meridionalis OMERI08G03470 I 0.668
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I 0.668
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I 0.668
OLONG_000103 Oryza longistaminata OLONG_000103 I 0.668
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I 0.668
Sb07g003870 Sorghum bicolor Sb07g003870 I 0.668
OB08G13700 Oryza brachyantha OB08G13700 I 0.668
OS08G0157600 Oryza sativa OS08G0157600 D 0.668
CCA1 Arabidopsis thaliana AT2G46830 D 0.662
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.662
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.662
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.662