BRADI1G34840 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI1G34840 T268181_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.662 0.696
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.662 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G34840.1 Myb 22 67

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_59912 Hordeum vulgare MLOC_59912 I 0.841
F775_22242 Aegilops tauschii F775_22242 I 0.827
TRIUR3_06252 Triticum urartu TRIUR3_06252 I 0.827
LPERR01G03340 Leersia perrieri LPERR01G03340 I 0.752
Pavir.J28275 Panicum virgatum Pavir.J28275 N 0.744
BGIOSGA002364 Oryza indica BGIOSGA002364 I 0.713
OBART01G03720 Oryza barthii OBART01G03720 I 0.713
OGLUM01G03980 Oryza glumaepatula OGLUM01G03980 I 0.713
OMERI01G03530 Oryza meridionalis OMERI01G03530 I 0.713
ONIVA01G04110 Oryza nivara ONIVA01G04110 I 0.713
OPUNC01G03310 Oryza punctata OPUNC01G03310 I 0.713
ORGLA01G0032300 Oryza glaberrima ORGLA01G0032300 I 0.713
ORUFI01G03800 Oryza rufipogon ORUFI01G03800 I 0.713
OS01G0156000 Oryza sativa OS01G0156000 I 0.713
Pavir.J37379 Panicum virgatum Pavir.J37379 N 0.703
Si002704m.g Setaria italica Si002704m.g I 0.697
Sb03g005480 Sorghum bicolor Sb03g005480 I 0.689
Traes_1BS_24DBD38A8 Triticum aestivum Traes_1BS_24DBD38A8 I 0.674
TRIUR3_24634 Triticum urartu TRIUR3_24634 I 0.674
mgf021826m Mimulus guttatus mgf021826m I 0.671
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.669
e_gw1.04.00.501.1 Ostreococcus tauri e_gw1.04.00.501.1 N 0.663
LHY Arabidopsis thaliana AT1G01060 D 0.662
LHY Arabidopsis lyrata fgenesh2_kg.1__131__AT1G01060.3 I 0.662
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.662
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.662
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.662