VND5 (Arabidopsis lyrata)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 fgenesh2_kg.2__212__AT1G62700.1 T292962_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC007
M07164_2.00 		Arabidopsis thaliana
TTRCKTVHDNNNYAMG
CKTRNNNHDBAMGYAA		 Dap-seq
OMalley et al.(2016)
VND4_colamp_a 		0.964 0.965
NAC007
M07165_2.00 		Arabidopsis thaliana
TGCKTVHDNHDYAMG
CKTRHDNHDBAMGCA		 Dap-seq
OMalley et al.(2016)
VND4_col 		0.964 0.965
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.916 0.842
ANAC076
M07224_2.00 		Arabidopsis thaliana
TRCKTVHNNHNYAMG
CKTRNDNNDBAMGYA		 Dap-seq
OMalley et al.(2016)
VND2_col_a 		0.911 0.842
ANAC076
M07225_2.00 		Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN
NNNDTDRCKTRNDNNDBAMGCAA		 Dap-seq
OMalley et al.(2016)
VND2_colamp_a 		0.911 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__212__AT1G62700.1 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Arabidopsis lyrata TFs

263 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC007 Arabidopsis thaliana AT1G12260 D 0.964
NAC037 Arabidopsis thaliana AT2G18060 D 0.916
ANAC076 Arabidopsis thaliana AT4G36160 D 0.911
VND1 Arabidopsis lyrata Al_scaffold_0003_3772 I 0.914
AMTR_s00011p00251570 Amborella trichopoda AMTR_s00011p00251570 I 0.949
AMTR_s00068p00207380 Amborella trichopoda AMTR_s00068p00207380 I 0.889
NAC026 Arabidopsis thaliana AT1G62700 I 0.941
BGIOSGA005950 Oryza indica BGIOSGA005950 I 0.889
BGIOSGA011539 Oryza indica BGIOSGA011539 I 0.912
BGIOSGA014649 Oryza indica BGIOSGA014649 I 0.925
BGIOSGA033343 Oryza indica BGIOSGA033343 I 0.911
Bo1g005810 Brassica oleracea Bo1g005810 I 0.910
Bo3g093950 Brassica oleracea Bo3g093950 I 0.918
Bo5g017120 Brassica oleracea Bo5g017120 I 0.958
Bo7g011640 Brassica oleracea Bo7g011640 I 0.918
Bo7g065010 Brassica oleracea Bo7g065010 I 0.871
Bo7g117820 Brassica oleracea Bo7g117820 I 0.911
Bo8g062650 Brassica oleracea Bo8g062650 I 0.964
Bo8g108300 Brassica oleracea Bo8g108300 I 0.961
Bra011667 Brassica rapa Bra011667 I 0.910
Bra012065 Brassica rapa Bra012065 I 0.871
Bra016783 Brassica rapa Bra016783 I 0.964
Bra017750 Brassica rapa Bra017750 I 0.911
Bra019750 Brassica rapa Bra019750 I 0.958
Bra026981 Brassica rapa Bra026981 I 0.961
Bra027024 Brassica rapa Bra027024 I 0.939
Bra039915 Brassica rapa Bra039915 I 0.929
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I 0.888
BRADI3G50067 Brachypodium distachyon BRADI3G50067 I 0.896
F775_07224 Aegilops tauschii F775_07224 I 0.888
F775_08057 Aegilops tauschii F775_08057 I 0.896
F775_20020 Aegilops tauschii F775_20020 I 0.908
VND4 Arabidopsis lyrata fgenesh2_kg.1__1330__AT1G12260.1 I 0.964
ANAC076 Arabidopsis lyrata fgenesh2_kg.7__450__AT4G36160.1 I 0.911
ANAC105 Arabidopsis lyrata fgenesh2_kg.8__2792__AT5G66300.1 I 0.871
GLYMA01G37310 Glycine max GLYMA01G37310 I 0.882
GLYMA04G13660 Glycine max GLYMA04G13660 I 0.917
GLYMA05G04250 Glycine max GLYMA05G04250 I 0.939
GLYMA06G47680 Glycine max GLYMA06G47680 I 0.928
GLYMA09G36600 Glycine max GLYMA09G36600 I 0.922
GLYMA11G03340 Glycine max GLYMA11G03340 I 0.935
GLYMA11G07990 Glycine max GLYMA11G07990 I 0.882
GLYMA12G00760 Glycine max GLYMA12G00760 I 0.924
GLYMA17G14700 Glycine max GLYMA17G14700 I 0.939
GRMZM2G025642 Zea mays GRMZM2G025642 I 0.887
GRMZM2G041668 Zea mays GRMZM2G041668 I 0.893
GRMZM2G178998 Zea mays GRMZM2G178998 I 0.908
GRMZM2G315140 Zea mays GRMZM2G315140 I 0.885
GRMZM2G354151 Zea mays GRMZM2G354151 I 0.889
GRMZM2G440219 Zea mays GRMZM2G440219 I 0.893
GSMUA_Achr11G03040_001 Musa acuminata GSMUA_Achr11G03040_001 I 0.918
GSMUA_Achr11G03780_001 Musa acuminata GSMUA_Achr11G03780_001 I 0.885
GSMUA_Achr11G17510_001 Musa acuminata GSMUA_Achr11G17510_001 I 0.912
GSMUA_Achr7G06640_001 Musa acuminata GSMUA_Achr7G06640_001 I 0.895
GSMUA_Achr8G11590_001 Musa acuminata GSMUA_Achr8G11590_001 I 0.908
GSMUA_Achr8G12100_001 Musa acuminata GSMUA_Achr8G12100_001 I 0.918
LPERR02G21010 Leersia perrieri LPERR02G21010 I 0.899
LPERR03G01990 Leersia perrieri LPERR03G01990 I 0.912
LPERR04G16200 Leersia perrieri LPERR04G16200 I 0.925
MLOC_15746 Hordeum vulgare MLOC_15746 I 0.880
MLOC_53086 Hordeum vulgare MLOC_53086 I 0.888
MLOC_56103 Hordeum vulgare MLOC_56103 I 0.900
MLOC_56769 Hordeum vulgare MLOC_56769 I 0.909
MTR_4g036030 Medicago truncatula MTR_4g036030 I 0.919
MTR_4g101680 Medicago truncatula MTR_4g101680 I 0.939
MTR_5g012080 Medicago truncatula MTR_5g012080 I 0.935
MTR_5g021710 Medicago truncatula MTR_5g021710 I 0.877
OB02G33070 Oryza brachyantha OB02G33070 I 0.899
OB03G12100 Oryza brachyantha OB03G12100 I 0.912
OB04G27030 Oryza brachyantha OB04G27030 I 0.925
OB10G23740 Oryza brachyantha OB10G23740 I 0.911
OBART02G25700 Oryza barthii OBART02G25700 I 0.899
OBART03G02180 Oryza barthii OBART03G02180 I 0.912
OBART04G20020 Oryza barthii OBART04G20020 I 0.925
OBART10G16620 Oryza barthii OBART10G16620 I 0.891
OGLUM02G26220 Oryza glumaepatula OGLUM02G26220 I 0.899
OGLUM03G02130 Oryza glumaepatula OGLUM03G02130 I 0.912
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I 0.925
OGLUM10G16690 Oryza glumaepatula OGLUM10G16690 I 0.891
OLONG_011521 Oryza longistaminata OLONG_011521 I 0.912
OLONG_016152 Oryza longistaminata OLONG_016152 I 0.902
OLONG_018618 Oryza longistaminata OLONG_018618 I 0.886
OMERI02G25220 Oryza meridionalis OMERI02G25220 I 0.899
OMERI03G02020 Oryza meridionalis OMERI03G02020 I 0.912
OMERI03G30800 Oryza meridionalis OMERI03G30800 I 0.925
OMERI10G13220 Oryza meridionalis OMERI10G13220 I 0.902
ONIVA02G28150 Oryza nivara ONIVA02G28150 I 0.899
ONIVA03G01790 Oryza nivara ONIVA03G01790 I 0.912
ONIVA04G18230 Oryza nivara ONIVA04G18230 I 0.925
ONIVA10G18400 Oryza nivara ONIVA10G18400 I 0.891
OPUNC02G23550 Oryza punctata OPUNC02G23550 I 0.894
OPUNC03G01920 Oryza punctata OPUNC03G01920 I 0.912
OPUNC04G17680 Oryza punctata OPUNC04G17680 I 0.925
ORGLA03G0019500 Oryza glaberrima ORGLA03G0019500 I 0.912
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I 0.925
ORUFI02G27110 Oryza rufipogon ORUFI02G27110 I 0.899
ORUFI03G01920 Oryza rufipogon ORUFI03G01920 I 0.912
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I 0.925
ORUFI10G17730 Oryza rufipogon ORUFI10G17730 I 0.891
OS02G0643600 Oryza sativa OS02G0643600 I 0.899
OS04G0536500 Oryza sativa OS04G0536500 I 0.925
OS10G0532000 Oryza sativa OS10G0532000 I 0.911
PGSC0003DMG400004740 Solanum tuberosum PGSC0003DMG400004740 I 0.893
PGSC0003DMG400021576 Solanum tuberosum PGSC0003DMG400021576 I 0.931
PGSC0003DMG400026079 Solanum tuberosum PGSC0003DMG400026079 I 0.872
PGSC0003DMG401003552 Solanum tuberosum PGSC0003DMG401003552 I 0.912
POPTR_0001s00220 Populus trichocarpa POPTR_0001s00220 I 0.948
POPTR_0003s11250 Populus trichocarpa POPTR_0003s11250 I 0.948
POPTR_0005s11870 Populus trichocarpa POPTR_0005s11870 I 0.919
POPTR_0012s14660 Populus trichocarpa POPTR_0012s14660 I 0.935
POPTR_0015s14770 Populus trichocarpa POPTR_0015s14770 I 0.934
PRUPE_ppa015786mg Prunus persica PRUPE_ppa015786mg I 0.934
PRUPE_ppa020139mg Prunus persica PRUPE_ppa020139mg I 0.934
PRUPE_ppa022264mg Prunus persica PRUPE_ppa022264mg I 0.905
Sb01g030760 Sorghum bicolor Sb01g030760 I 0.901
Sb01g048730 Sorghum bicolor Sb01g048730 I 0.910
Sb04g033570 Sorghum bicolor Sb04g033570 I 0.877
Sb06g023780 Sorghum bicolor Sb06g023780 I 0.895
Sb10g000460 Sorghum bicolor Sb10g000460 I 0.897
SELMODRAFT_100973 Selaginella moellendorffii SELMODRAFT_100973 I 0.919
SELMODRAFT_451784 Selaginella moellendorffii SELMODRAFT_451784 I 0.900
SELMODRAFT_57388 Selaginella moellendorffii SELMODRAFT_57388 I 0.900
SELMODRAFT_71405 Selaginella moellendorffii SELMODRAFT_71405 I 0.919
Si006829m.g Setaria italica Si006829m.g I 0.893
Si010504m.g Setaria italica Si010504m.g I 0.927
Si017679m.g Setaria italica Si017679m.g I 0.885
Si036363m.g Setaria italica Si036363m.g I 0.910
Si039467m.g Setaria italica Si039467m.g I 0.900
Solyc02g084350.2 Solanum lycopersicum Solyc02g084350.2 I 0.912
Solyc03g083880.2 Solanum lycopersicum Solyc03g083880.2 I 0.874
Solyc06g034340.1 Solanum lycopersicum Solyc06g034340.1 I 0.931
Solyc06g065410.2 Solanum lycopersicum Solyc06g065410.2 I 0.872
Solyc08g079120.1 Solanum lycopersicum Solyc08g079120.1 I 0.910
TCM_000235 Theobroma cacao TCM_000235 I 0.919
TCM_014939 Theobroma cacao TCM_014939 I 0.932
TCM_016035 Theobroma cacao TCM_016035 I 0.948
Traes_2AL_82C3E7E14 Triticum aestivum Traes_2AL_82C3E7E14 I 0.880
Traes_2BL_24E6E8DF9 Triticum aestivum Traes_2BL_24E6E8DF9 I 0.880
Traes_2DL_343FA6101 Triticum aestivum Traes_2DL_343FA6101 I 0.878
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I 0.888
Traes_4BL_03B8EA3BF Triticum aestivum Traes_4BL_03B8EA3BF I 0.908
Traes_4DL_54E14ABCB Triticum aestivum Traes_4DL_54E14ABCB I 0.908
Traes_6AL_BB7207AD1 Triticum aestivum Traes_6AL_BB7207AD1 I 0.896
Traes_6BL_8F77BF933 Triticum aestivum Traes_6BL_8F77BF933 I 0.896
Traes_6DL_D0BE06357 Triticum aestivum Traes_6DL_D0BE06357 I 0.896
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I 0.888
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I 0.888
TRIUR3_08851 Triticum urartu TRIUR3_08851 I 0.888
TRIUR3_20707 Triticum urartu TRIUR3_20707 I 0.896
VIT_02s0154g00020 Vitis vinifera VIT_02s0154g00020 I 0.945
ANAC076 Vitis vinifera VIT_04s0023g03110 I 0.919
VIT_16s0022g00690 Vitis vinifera VIT_16s0022g00690 I 0.934
Ca_01981 Cicer arietinum Ca_01981 I 0.882
Ca_02365 Cicer arietinum Ca_02365 I 0.937
Ca_08693 Cicer arietinum Ca_08693 I 0.926
Cla005768 Citrullus lanatus Cla005768 I 0.933
Cla006372 Citrullus lanatus Cla006372 I 0.930
Cla011742 Citrullus lanatus Cla011742 I 0.922
Cla014492 Citrullus lanatus Cla014492 I 0.903
Pm019488 Prunus mume Pm019488 I 0.934
Pm019490 Prunus mume Pm019490 I 0.934
Pm023559 Prunus mume Pm023559 I 0.934
Pm026735 Prunus mume Pm026735 I 0.905
28200.m000189 Ricinus communis 28200.m000189 I 0.948
28623.m000400 Ricinus communis 28623.m000400 I 0.916
30147.m014211 Ricinus communis 30147.m014211 I 0.934
cassava24947.valid.m1 Manihot esculenta cassava24947.valid.m1 I 0.919
cassava26615.m1 Manihot esculenta cassava26615.m1 I 0.915
cassava46384.m1 Manihot esculenta cassava46384.m1 I 0.944
cassava47039.m1 Manihot esculenta cassava47039.m1 I 0.932
Cucsa.043420 Cucumis sativus Cucsa.043420 I 0.916
Cucsa.251620 Cucumis sativus Cucsa.251620 I 0.930
Cucsa.302120 Cucumis sativus Cucsa.302120 I 0.952
Cucsa.320590 Cucumis sativus Cucsa.320590 I 0.947
e_gw1.201.156.1 Physcomitrella patens e_gw1.201.156.1 I 0.900
mgf020336m Mimulus guttatus mgf020336m I 0.943
mgf021916m Mimulus guttatus mgf021916m I 0.929
mgf022574m Mimulus guttatus mgf022574m I 0.916
Aquca_006_00155 Aquilegia coerulea Aquca_006_00155 I 0.907
Aquca_007_00369 Aquilegia coerulea Aquca_007_00369 I 0.874
Aquca_013_00692 Aquilegia coerulea Aquca_013_00692 I 0.927
Bostr.0568s0042 Boechera stricta Bostr.0568s0042 I 0.871
Bostr.13671s0233 Boechera stricta Bostr.13671s0233 I 0.964
Bostr.18351s0273 Boechera stricta Bostr.18351s0273 I 0.901
Bostr.22157s0066 Boechera stricta Bostr.22157s0066 I 0.970
Bostr.7867s1483 Boechera stricta Bostr.7867s1483 I 0.900
Cagra.0568s0135 Capsella grandiflora Cagra.0568s0135 I 0.964
Cagra.10427s0040 Capsella grandiflora Cagra.10427s0040 I 0.871
Cagra.1670s0031 Capsella grandiflora Cagra.1670s0031 I 0.972
Cagra.4734s0006 Capsella grandiflora Cagra.4734s0006 I 0.911
Carubv10004997m.g Capsella rubella Carubv10004997m.g I 0.911
Carubv10009366m.g Capsella rubella Carubv10009366m.g I 0.964
Carubv10022351m.g Capsella rubella Carubv10022351m.g I 0.972
Carubv10026898m.g Capsella rubella Carubv10026898m.g I 0.871
Ciclev10006988m.g Citrus clementina Ciclev10006988m.g I 0.932
Ciclev10024218m.g Citrus clementina Ciclev10024218m.g I 0.950
Ciclev10026114m.g Citrus clementina Ciclev10026114m.g I 0.919
Eucgr.A02887 Eucalyptus grandis Eucgr.A02887 I 0.932
Eucgr.I02366 Eucalyptus grandis Eucgr.I02366 I 0.915
evm.TU.supercontig_29.118 Carica papaya evm.TU.supercontig_29.118 I 0.961
evm.TU.supercontig_3.311 Carica papaya evm.TU.supercontig_3.311 I 0.920
evm.TU.supercontig_6.226 Carica papaya evm.TU.supercontig_6.226 I 0.919
gene14869-v1.0-hybrid Fragaria vesca gene14869-v1.0-hybrid I 0.901
gene21248-v1.0-hybrid Fragaria vesca gene21248-v1.0-hybrid I 0.934
gene32254-v1.0-hybrid Fragaria vesca gene32254-v1.0-hybrid I 0.942
Gorai.001G048200 Gossypium raimondii Gorai.001G048200 I 0.932
Gorai.003G010700 Gossypium raimondii Gorai.003G010700 I 0.916
Gorai.003G114100 Gossypium raimondii Gorai.003G114100 I 0.909
Gorai.003G169000 Gossypium raimondii Gorai.003G169000 I 0.932
Gorai.004G201100 Gossypium raimondii Gorai.004G201100 I 0.919
Gorai.007G048000 Gossypium raimondii Gorai.007G048000 I 0.873
Gorai.007G196400 Gossypium raimondii Gorai.007G196400 I 0.920
Gorai.008G063600 Gossypium raimondii Gorai.008G063600 I 0.919
Gorai.008G236400 Gossypium raimondii Gorai.008G236400 I 0.930
Lus10004338.g Linum usitatissimum Lus10004338.g I 0.886
Lus10024601.g Linum usitatissimum Lus10024601.g I 0.946
Lus10028372.g Linum usitatissimum Lus10028372.g I 0.909
Lus10031142.g Linum usitatissimum Lus10031142.g I 0.935
Lus10031721.g Linum usitatissimum Lus10031721.g I 0.935
Lus10032238.g Linum usitatissimum Lus10032238.g I 0.937
Lus10041822.g Linum usitatissimum Lus10041822.g I 0.909
MDP0000131126 Malus domestica MDP0000131126 I 0.911
MDP0000136180 Malus domestica MDP0000136180 I 0.905
MDP0000176447 Malus domestica MDP0000176447 I 0.905
MDP0000221977 Malus domestica MDP0000221977 I 0.911
MDP0000226701 Malus domestica MDP0000226701 I 0.917
MDP0000246470 Malus domestica MDP0000246470 I 0.922
MDP0000254112 Malus domestica MDP0000254112 I 0.922
MDP0000298965 Malus domestica MDP0000298965 I 0.905
MDP0000299959 Malus domestica MDP0000299959 I 0.905
MDP0000320566 Malus domestica MDP0000320566 I 0.918
orange1.1g018596m.g Citrus sinensis orange1.1g018596m.g I 0.932
orange1.1g020354m.g Citrus sinensis orange1.1g020354m.g I 0.950
orange1.1g021187m.g Citrus sinensis orange1.1g021187m.g I 0.919
Pavir.Da02426 Panicum virgatum Pavir.Da02426 I 0.897
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I 0.927
Pavir.Ia02924 Panicum virgatum Pavir.Ia02924 I 0.899
Pavir.Ib00161 Panicum virgatum Pavir.Ib00161 I 0.910
Pavir.Ib02477 Panicum virgatum Pavir.Ib02477 I 0.899
Pavir.J07126 Panicum virgatum Pavir.J07126 I 0.927
Pavir.J26987 Panicum virgatum Pavir.J26987 I 0.897
Pavir.J32898 Panicum virgatum Pavir.J32898 I 0.907
Pavir.J39804 Panicum virgatum Pavir.J39804 I 0.885
SapurV1A.0129s0210 Salix purpurea SapurV1A.0129s0210 I 0.934
SapurV1A.0166s0460 Salix purpurea SapurV1A.0166s0460 I 0.905
SapurV1A.0367s0210 Salix purpurea SapurV1A.0367s0210 I 0.928
SapurV1A.0487s0230 Salix purpurea SapurV1A.0487s0230 I 0.919
SapurV1A.0634s0120 Salix purpurea SapurV1A.0634s0120 I 0.945
SapurV1A.1275s0070 Salix purpurea SapurV1A.1275s0070 I 0.948
SapurV1A.3982s0010 Salix purpurea SapurV1A.3982s0010 I 0.905
Thhalv10005380m.g Eutrema salsugineum Thhalv10005380m.g I 0.871
Thhalv10007823m.g Eutrema salsugineum Thhalv10007823m.g I 0.964
Thhalv10022756m.g Eutrema salsugineum Thhalv10022756m.g I 0.919
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.941
Thhalv10025510m.g Eutrema salsugineum Thhalv10025510m.g I 0.907
PK11173.1 Cannabis sativa PK11173.1 I 0.913
PK23416.1 Cannabis sativa PK23416.1 I 0.948
PK28510.1 Cannabis sativa PK28510.1 I 0.935
LjSGA_013013.1 Lotus japonicus LjSGA_013013.1 I 0.929
LjSGA_069569.1 Lotus japonicus LjSGA_069569.1 I 0.929
PDK_20s1306451g001 Phoenix dactylifera PDK_20s1306451g001 I 0.920
PDK_20s1503311g001 Phoenix dactylifera PDK_20s1503311g001 I 0.887
estExt_gwp_gw1.C_2230002 Physcomitrella patens estExt_gwp_gw1.C_2230002 N 0.887