CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400026332
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400026332
T295158_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400067707
NAC/NAM
6
136
SPGFRFYPTEEELISFYLHKKLEGKRPELDRVIPVVTIYDFDPWHLPKFHGELCMGDTEQWFFFVPRQEREARGGRPCRTTNCGYWKATGSPSYVYSSNSKVIGVKKSMVFYKGKAPTGKKTKWKMNEYRA
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
148 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ILR3
Arabidopsis thaliana
AT5G54680
D
0.000
PRUPE_ppa009077mg
Prunus persica
PRUPE_ppa009077mg
I
0.000
Ciclev10009354m.g
Citrus clementina
Ciclev10009354m.g
I
0.000
PRUPE_ppa010730mg
Prunus persica
PRUPE_ppa010730mg
I
0.000
TCM_031118
Theobroma cacao
TCM_031118
I
0.000
gene24654-v1.0-hybrid
Fragaria vesca
gene24654-v1.0-hybrid
I
0.000
gene03303-v1.0-hybrid
Fragaria vesca
gene03303-v1.0-hybrid
I
0.000
evm.TU.supercontig_97.78
Carica papaya
evm.TU.supercontig_97.78
I
0.000
VIT_12s0059g02650
Vitis vinifera
VIT_12s0059g02650
I
0.000
Ca_06956
Cicer arietinum
Ca_06956
I
0.000
Ca_16355
Cicer arietinum
Ca_16355
I
0.000
Cla001735
Citrullus lanatus
Cla001735
I
0.000
Pm029465
Prunus mume
Pm029465
I
0.000
28166.m001054
Ricinus communis
28166.m001054
I
0.000
cassava24574.valid.m1
Manihot esculenta
cassava24574.valid.m1
I
0.000
cassava37031.valid.m1
Manihot esculenta
cassava37031.valid.m1
I
0.000
cassava37032.valid.m1
Manihot esculenta
cassava37032.valid.m1
I
0.000
Cucsa.267130
Cucumis sativus
Cucsa.267130
I
0.000
Cucsa.267170
Cucumis sativus
Cucsa.267170
I
0.000
e_gw1.229.33.1
Physcomitrella patens
e_gw1.229.33.1
I
0.000
estExt_gwp_gw1.C_2460032
Physcomitrella patens
estExt_gwp_gw1.C_2460032
I
0.000
fgenesh1_pg.scaffold_13000185
Physcomitrella patens
fgenesh1_pg.scaffold_13000185
I
0.000
Aquca_005_00425
Aquilegia coerulea
Aquca_005_00425
I
0.000
Eucgr.F03420
Eucalyptus grandis
Eucgr.F03420
I
0.000
Bostr.26833s0797
Boechera stricta
Bostr.26833s0797
I
0.000
Cagra.1629s0040
Capsella grandiflora
Cagra.1629s0040
I
0.000
Carubv10026758m.g
Capsella rubella
Carubv10026758m.g
I
0.000
POPTR_0001s44230
Populus trichocarpa
POPTR_0001s44230
I
0.000
Bra002964
Brassica rapa
Bra002964
I
0.000
Bra022738
Brassica rapa
Bra022738
I
0.000
Bra029011
Brassica rapa
Bra029011
I
0.000
PK23013.1
Cannabis sativa
PK23013.1
I
0.000
Thhalv10014564m.g
Eutrema salsugineum
Thhalv10014564m.g
I
0.000
ILR3
Arabidopsis lyrata
fgenesh2_kg.8__1365__AT5G54680.1
I
0.000
GLYMA06G41620
Glycine max
GLYMA06G41620
I
0.000
GLYMA12G34300
Glycine max
GLYMA12G34300
I
0.000
GLYMA13G36260
Glycine max
GLYMA13G36260
I
0.000
GSMUA_Achr11G14790_001
Musa acuminata
GSMUA_Achr11G14790_001
I
0.000
SapurV1A.0712s0010
Salix purpurea
SapurV1A.0712s0010
I
0.000
MTR_2g082640
Medicago truncatula
MTR_2g082640
I
0.000
MTR_4g081370
Medicago truncatula
MTR_4g081370
I
0.000
orange1.1g026599m.g
Citrus sinensis
orange1.1g026599m.g
I
0.000
MDP0000264803
Malus domestica
MDP0000264803
I
0.000
Lus10043076.g
Linum usitatissimum
Lus10043076.g
I
0.000
Lus10011167.g
Linum usitatissimum
Lus10011167.g
I
0.000
PGSC0003DMG400019263
Solanum tuberosum
PGSC0003DMG400019263
I
0.000
POPTR_0011s13580
Populus trichocarpa
POPTR_0011s13580
I
0.000
SapurV1A.0535s0060
Salix purpurea
SapurV1A.0535s0060
N
0.000
Pavir.J05070
Panicum virgatum
Pavir.J05070
N
0.000
SapurV1A.3390s0010
Salix purpurea
SapurV1A.3390s0010
N
0.000
Pavir.Fb00223
Panicum virgatum
Pavir.Fb00223
N
0.000
Pavir.Fa02284
Panicum virgatum
Pavir.Fa02284
N
0.000
Gorai.007G314800
Gossypium raimondii
Gorai.007G314800
N
0.000
Gorai.009G176000
Gossypium raimondii
Gorai.009G176000
N
0.000
chr3.CM0155.80.nd
Lotus japonicus
chr3.CM0155.80.nd
N
0.000
OPUNC08G02220
Oryza punctata
OPUNC08G02220
N
0.000
BGIOSGA027691
Oryza indica
BGIOSGA027691
N
0.000
BRADI3G14590
Brachypodium distachyon
BRADI3G14590
N
0.000
F775_31340
Aegilops tauschii
F775_31340
N
0.000
LPERR08G02470
Leersia perrieri
LPERR08G02470
N
0.000
MLOC_6315
Hordeum vulgare
MLOC_6315
N
0.000
OB08G12550
Oryza brachyantha
OB08G12550
N
0.000
OGLUM08G02420
Oryza glumaepatula
OGLUM08G02420
N
0.000
OLONG_003616
Oryza longistaminata
OLONG_003616
N
0.000
ONIVA08G02550
Oryza nivara
ONIVA08G02550
N
0.000
Aquca_017_00706
Aquilegia coerulea
Aquca_017_00706
N
0.000
ORGLA08G0018000
Oryza glaberrima
ORGLA08G0018000
N
0.000
ORUFI08G02650
Oryza rufipogon
ORUFI08G02650
N
0.000
OS08G0138500
Oryza sativa
OS08G0138500
N
0.000
Si014339m.g
Setaria italica
Si014339m.g
N
0.000
Traes_7AL_B9345EB83
Triticum aestivum
Traes_7AL_B9345EB83
N
0.000
Traes_7BL_6324A95B5
Triticum aestivum
Traes_7BL_6324A95B5
N
0.000
Traes_7DL_88B60203A
Triticum aestivum
Traes_7DL_88B60203A
N
0.000
TRIUR3_32784
Triticum urartu
TRIUR3_32784
N
0.000