POPTR_0001s40680 (Populus trichocarpa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 POPTR_0001s40680 T295210_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC098
M07239_2.00 		Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC2_colamp_a 		0.943 0.860
NAC098
M07240_2.00 		Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN		 Dap-seq
OMalley et al.(2016)
CUC2_col 		0.943 0.860
NAC079
M02373_2.00 		Arabidopsis thaliana
TTGCGTRY
RYACGCAA		 PBM
Weirauch et al.(2014)
pTH7399 		0.930 0.798
NAC079
M07228_2.00 		Arabidopsis thaliana
CBWNHNNHACACGYWA
TWRCGTGTDNNDNWVG		 Dap-seq
OMalley et al.(2016)
ANAC079_colamp_a 		0.930 0.798
NAC079
M07229_2.00 		Arabidopsis thaliana
NTWNCKTVHNNHWCAMGYWAH
DTWRCKTGWDNNDBAMGNWAN		 Dap-seq
OMalley et al.(2016)
ANAC079_col 		0.930 0.798
ANAC080
M02376_2.00 		Arabidopsis lyrata
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH9230 		0.928 0.807
NAC100
M02375_2.00 		Arabidopsis thaliana
NBAMKNHWNN
NNWDNMKTVN		 PBM
Weirauch et al.(2014)
pTH7239 		0.926 0.807
ANAC100
M02377_2.00 		Arabidopsis lyrata
DYACGYHANN
NNTDRCGTRH		 PBM
Weirauch et al.(2014)
pTH9234 		0.923 0.807
NAC054
M07205_2.00 		Arabidopsis thaliana
CKTVHNNHRCACGYHANCW
WGNTDRCGTGYDNNDBAMG		 Dap-seq
OMalley et al.(2016)
CUC1_colamp_a 		0.922 0.860
NAC054
M07206_2.00 		Arabidopsis thaliana
TWNCKTGHNNNDCAMG
CKTGHNNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
CUC1_col_v31 		0.922 0.860
NAC92
M00979_2.00 		Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN		 PBM
Lindemose et al.(2014)
ANAC092 		0.917 0.772
NAC92
M00730_2.00 		Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH		 PBM
Chang et al.(2013)
pTH7335 		0.917 0.772
NAC92
M07234_2.00 		Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a 		0.917 0.772
NAC92
M07235_2.00 		Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW		 Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a 		0.917 0.772
NAC59
M11080_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC059_01 		0.913 0.754
e_gw1.288.15.1
M02381_2.00 		Physcomitrella patens
NNNBAMKNHW
WDNMKTVNNN		 PBM
Weirauch et al.(2014)
pTH8467 		0.908 0.789
NAC031
M07182_2.00 		Arabidopsis thaliana
NTWDCKTGTNNHWYACGY
RCGTRWDNNACAMGHWAN		 Dap-seq
OMalley et al.(2016)
CUC3_col_a 		0.898 0.702
NAC031
M07183_2.00 		Arabidopsis thaliana
CKTGTNNHDCACGYHA
TDRCGTGHDNNACAMG		 Dap-seq
OMalley et al.(2016)
CUC3_colamp_a 		0.898 0.702
ANAC038
M07188_2.00 		Arabidopsis thaliana
DNCKTRHNNHDCAMGYWA
TWRCKTGHDNNDYAMGNH		 Dap-seq
OMalley et al.(2016)
ANAC038_col_a 		0.898 0.807
ANAC038
M07189_2.00 		Arabidopsis thaliana
TTDCTTGWNNHDYAMGHHAHH
DDTDDCKTRHDNNWCAAGHAA		 Dap-seq
OMalley et al.(2016)
ANAC038_colamp_a 		0.898 0.807
anac058
M00886_2.00 		Arabidopsis thaliana
CGTTGTCT
AGACAACG		 PBM
Franco-Zorrilla et al.(2014)
ANAC58 		0.884 0.798
anac058
M07210_2.00 		Arabidopsis thaliana
CKTGHNNNRCAMGYWA
TWRCKTGYNNNDCAMG		 Dap-seq
OMalley et al.(2016)
ANAC058_col_a 		0.884 0.798
anac058
M07211_2.00 		Arabidopsis thaliana
TDCKTGHNNNDCAMGHHA
TDDCKTGHNNNDCAMGHA		 Dap-seq
OMalley et al.(2016)
ANAC058_colamp_a 		0.884 0.798
ANAC087
M07232_2.00 		Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA		 Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a 		0.880 0.737
ANAC087
M07233_2.00 		Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA		 Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a 		0.880 0.737
e_gw1.327.11.1
M02382_2.00 		Physcomitrella patens
NTTDYRTWWN
NWWAYRHAAN		 PBM
Weirauch et al.(2014)
pTH8478 		0.880 0.728
e_gw1.159.34.1
M02379_2.00 		Physcomitrella patens
DYACGNHANN
NNTDNCGTRH		 PBM
Weirauch et al.(2014)
pTH8477 		0.877 0.737
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s40680.1 NAC/NAM 15 141

Links

Other NAC/NAM family TFs
Other Populus trichocarpa TFs

434 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HSFA4A Arabidopsis thaliana AT4G18880 D
HSF4 Homo sapiens ENSG00000102878 D
OMERI02G17330 Oryza meridionalis OMERI02G17330 I
Traes_6AS_1537629B3 Triticum aestivum Traes_6AS_1537629B3 I
TCM_029630 Theobroma cacao TCM_029630 I
Si019082m.g Setaria italica Si019082m.g I
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I
POPTR_0004s06090 Populus trichocarpa POPTR_0004s06090 I
HSFA5 Oryza sativa OS02G0496100 I
ORUFI02G18130 Oryza rufipogon ORUFI02G18130 I
OPUNC02G15430 Oryza punctata OPUNC02G15430 I
ONIVA02G18700 Oryza nivara ONIVA02G18700 I
Traes_6DS_C59B6322F Triticum aestivum Traes_6DS_C59B6322F I
OGLUM02G17550 Oryza glumaepatula OGLUM02G17550 I
MTR_8g087540 Medicago truncatula MTR_8g087540 I
LPERR02G13860 Leersia perrieri LPERR02G13860 I
GRMZM2G179802 Zea mays GRMZM2G179802 I
GLYMA08G12630 Glycine max GLYMA08G12630 I
GLYMA05G29470 Glycine max GLYMA05G29470 I
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I
F775_00937 Aegilops tauschii F775_00937 I
HSF4 Tursiops truncatus ENSTTRG00000010241 I
ENSSTOG00000027009 Ictidomys tridecemlineatus ENSSTOG00000027009 I
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I
PK09831.1 Cannabis sativa PK09831.1 I
MDP0000126826 Malus domestica MDP0000126826 I
Lus10015237.g Linum usitatissimum Lus10015237.g I
Lus10005420.g Linum usitatissimum Lus10005420.g I
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I
EuGene.0200010072 Micromonas sp RCC299 EuGene.0200010072 I
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I
Carubv10027643m.g Capsella rubella Carubv10027643m.g I
Carubv10004953m.g Capsella rubella Carubv10004953m.g I
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I
Hsf4 Rattus norvegicus ENSRNOG00000015253 I
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I
Bostr.0556s0470 Boechera stricta Bostr.0556s0470 I
mgf006947m Mimulus guttatus mgf006947m I
mgf006143m Mimulus guttatus mgf006143m I
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I
cassava14764.m1 Manihot esculenta cassava14764.m1 I
Pm010169 Prunus mume Pm010169 I
ENSBTAP00000004568-D1 Bos grunniens ENSBTAP00000004568-D1 I
TRIUR3_11025 Triticum urartu TRIUR3_11025 I
Bra013358 Brassica rapa Bra013358 I
HSF4 Canis familiaris ENSCAFG00000020379 I
HSF4 Sus scrofa ENSSSCG00000002792 I
ENSAMEG00000017238 Ailuropoda melanoleuca ENSAMEG00000017238 I
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I
Bra030021 Brassica rapa Bra030021 I
Bra029226 Brassica rapa Bra029226 I
Bra016998 Brassica rapa Bra016998 I
Bra016996 Brassica rapa Bra016996 I
Bra013412 Brassica rapa Bra013412 I
Bra013406 Brassica rapa Bra013406 I
HSF4 Bos taurus ENSBTAG00000003514 I
Bra012571 Brassica rapa Bra012571 I
Bra002882 Brassica rapa Bra002882 I
Bo7g106320 Brassica oleracea Bo7g106320 I
Bo4g190160 Brassica oleracea Bo4g190160 I
Bo3g157380 Brassica oleracea Bo3g157380 I
Bo2g165560 Brassica oleracea Bo2g165560 I
Bo2g165540 Brassica oleracea Bo2g165540 I
Bo1g020010 Brassica oleracea Bo1g020010 I
BGIOSGA006438 Oryza indica BGIOSGA006438 I
Hsf4 Mus musculus ENSMUSG00000033249 I
HSF4 Pteropus vampyrus ENSPVAG00000000402 I
HSF4 Pan troglodytes ENSPTRG00000034007 I
ENSPPYG00000007441 Pongo abelii ENSPPYG00000007441 I
ENSPANG00000005017 Papio anubis ENSPANG00000005017 I
HSF4 Ochotona princeps ENSOPRG00000015074 I
HSF4 Otolemur garnettii ENSOGAG00000001391 I
HSF4 Oryctolagus cuniculus ENSOCUG00000010001 I
ENSOARG00000002740 Ovis aries ENSOARG00000002740 I
ENSNLEG00000004338 Nomascus leucogenys ENSNLEG00000004338 I
HSF4 Cavia porcellus ENSCPOG00000010834 I
ENSMPUG00000005418 Mustela putorius furo ENSMPUG00000005418 I
HSF4 Macaca mulatta ENSMMUG00000005906 I
HSF4 Myotis lucifugus ENSMLUG00000011083 I
HSF4 Gorilla gorilla ENSGGOG00000011899 I
HSF4 Felis catus ENSFCAG00000014099 I
HSF4 Equus caballus ENSECAG00000016708 I
Hsf4 Dipodomys ordii ENSDORG00000015128 I
HSF4 Dasypus novemcinctus ENSDNOG00000032363 I
ENSCSAG00000003768 Chlorocebus sabaeus ENSCSAG00000003768 I
Bra016994 Brassica rapa Bra016994 N
Bo4g190190 Brassica oleracea Bo4g190190 N
Bo01835s010 Brassica oleracea Bo01835s010 N