CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0016s07680
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0016s07680
T295341_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0016s07680.1
NAC/NAM
35
167
KIGFRFYPTEEELVSFYLRNKLEARREDLLRVMDRLIPVLDIYGFNPWELPRDLCHGDPEECFFFIPRQKSEAHGGRPKRLTATGYWKATGSPGSVYSSKSNRCIGEKRTMVFYNGRAPNGQKTDWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava32867.m1
Manihot esculenta
cassava32867.m1
N
0.889
SapurV1A.0768s0010
Salix purpurea
SapurV1A.0768s0010
N
0.983
orange1.1g039532m.g
Citrus sinensis
orange1.1g039532m.g
N
0.983
MDP0000506233
Malus domestica
MDP0000506233
N
0.934
MDP0000252746
Malus domestica
MDP0000252746
N
0.927
MDP0000252435
Malus domestica
MDP0000252435
N
0.947
Gorai.009G399900
Gossypium raimondii
Gorai.009G399900
N
0.977
Gorai.002G238300
Gossypium raimondii
Gorai.002G238300
N
0.930
gene15644-v1.0-hybrid
Fragaria vesca
gene15644-v1.0-hybrid
N
0.985
Eucgr.A02635
Eucalyptus grandis
Eucgr.A02635
N
0.912
Ciclev10012468m.g
Citrus clementina
Ciclev10012468m.g
N
0.983
Aquca_005_00168
Aquilegia coerulea
Aquca_005_00168
N
0.874
POPTR_0006s22580
Populus trichocarpa
POPTR_0006s22580
N
0.990
cassava19207.valid.m1
Manihot esculenta
cassava19207.valid.m1
N
0.969
cassava15688.m1
Manihot esculenta
cassava15688.m1
N
0.873
cassava15680.m1
Manihot esculenta
cassava15680.m1
N
0.976
28629.m000575
Ricinus communis
28629.m000575
N
0.984
Pm001403
Prunus mume
Pm001403
N
0.895
Cla018692
Citrullus lanatus
Cla018692
N
0.958
VIT_08s0007g02940
Vitis vinifera
VIT_08s0007g02940
N
0.963
TCM_022690
Theobroma cacao
TCM_022690
N
0.987
TCM_022676
Theobroma cacao
TCM_022676
N
0.988
PRUPE_ppa025103mg
Prunus persica
PRUPE_ppa025103mg
N
0.988
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.895