CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_17s0000g00770
(
Vitis vinifera
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
VIT_17s0000g00770
T296430_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_17s0000g00770.t01
NAC/NAM
15
138
PLGFRFQPTDEELVFQYLKCKVFSRPLPASIIPEINVSKYDPWDLPGDLEQEKYFFSNKEAKYQIGNRSNRATSSGYWKASGTDKQITSSRNSQLVGMKKTLVFYRGKPPYDSRTDWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Vitis vinifera
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla001517
Citrullus lanatus
Cla001517
I
0.875
chr1.CM0017.80.nc
Lotus japonicus
chr1.CM0017.80.nc
I
0.878
Cucsa.349370
Cucumis sativus
Cucsa.349370
I
0.873
Pm007070
Prunus mume
Pm007070
I
0.872
TCM_014713
Theobroma cacao
TCM_014713
I
0.917
PRUPE_ppa010222mg
Prunus persica
PRUPE_ppa010222mg
I
0.872
GLYMA18G53954
Glycine max
GLYMA18G53954
I
0.893
GLYMA08G47520
Glycine max
GLYMA08G47520
I
0.894
POPTR_0015s11420
Populus trichocarpa
POPTR_0015s11420
N
0.882
PRUPE_ppa027024mg
Prunus persica
PRUPE_ppa027024mg
N
0.877
Solyc01g009860.2
Solanum lycopersicum
Solyc01g009860.2
N
0.877
POPTR_0012s10530
Populus trichocarpa
POPTR_0012s10530
N
0.881
GLYMA06G17480
Glycine max
GLYMA06G17480
N
0.880
PGSC0003DMG400011891
Solanum tuberosum
PGSC0003DMG400011891
N
0.877
Pm024558
Prunus mume
Pm024558
N
0.877
cassava37235.valid.m1
Manihot esculenta
cassava37235.valid.m1
N
0.906
evm.TU.supercontig_4.138
Carica papaya
evm.TU.supercontig_4.138
N
0.892
gene06460-v1.0-hybrid
Fragaria vesca
gene06460-v1.0-hybrid
N
0.898
MDP0000130686
Malus domestica
MDP0000130686
N
0.886
SapurV1A.1562s0030
Salix purpurea
SapurV1A.1562s0030
N
0.875
SapurV1A.1562s0040
Salix purpurea
SapurV1A.1562s0040
N
0.875