CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla007018
(
Citrullus lanatus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cla007018
T296546_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla007018
NAC/NAM
14
144
LPGFRFHPTEEELLEFYLKQMVFGKRRHSFDVIGFLNIYQHDPWDLPDLAKNGEREWYFFVPRDRKHGGCGGGRPNRTTGIGYWKATGSDRRILSLSDPKRFIGLRKTLVFYKGRAPRGTKTDWVMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Citrullus lanatus
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0005s10610
Populus trichocarpa
POPTR_0005s10610
I
0.983
Cagra.7865s0013
Capsella grandiflora
Cagra.7865s0013
I
0.891
Carubv10011108m.g
Capsella rubella
Carubv10011108m.g
I
0.882
cassava23439.valid.m1
Manihot esculenta
cassava23439.valid.m1
I
0.982
Gorai.009G309000
Gossypium raimondii
Gorai.009G309000
I
0.871
Gorai.010G171100
Gossypium raimondii
Gorai.010G171100
I
0.904
TRIUR3_18561
Triticum urartu
TRIUR3_18561
I
0.943
Gorai.010G236700
Gossypium raimondii
Gorai.010G236700
I
0.877
SELMODRAFT_71305
Selaginella moellendorffii
SELMODRAFT_71305
I
0.871
SELMODRAFT_69090
Selaginella moellendorffii
SELMODRAFT_69090
I
0.874
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.871
POPTR_0003s14950
Populus trichocarpa
POPTR_0003s14950
I
0.889
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.871
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.871
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.871
Bo3g065200
Brassica oleracea
Bo3g065200
I
0.872
PK05686.1
Cannabis sativa
PK05686.1
I
0.975
SapurV1A.0958s0170
Salix purpurea
SapurV1A.0958s0170
I
0.974
SapurV1A.0059s0580
Salix purpurea
SapurV1A.0059s0580
I
0.894
Pavir.J38855
Panicum virgatum
Pavir.J38855
I
0.885
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.879
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.871
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.871
orange1.1g023427m.g
Citrus sinensis
orange1.1g023427m.g
N
0.879
MDP0000480581
Malus domestica
MDP0000480581
N
0.916
SapurV1A.0080s0480
Salix purpurea
SapurV1A.0080s0480
N
0.879
chr3.CM0460.350.nd
Lotus japonicus
chr3.CM0460.350.nd
N
0.891
MDP0000868556
Malus domestica
MDP0000868556
N
0.916
Gorai.008G038800
Gossypium raimondii
Gorai.008G038800
N
0.917
gene17203-v1.0-hybrid
Fragaria vesca
gene17203-v1.0-hybrid
N
0.893
evm.TU.supercontig_320.2
Carica papaya
evm.TU.supercontig_320.2
N
0.901
anac036
Arabidopsis thaliana
AT2G17040
N
0.889
Eucgr.I01494
Eucalyptus grandis
Eucgr.I01494
N
0.897
Ciclev10029007m.g
Citrus clementina
Ciclev10029007m.g
N
0.879
PRUPE_ppa009455mg
Prunus persica
PRUPE_ppa009455mg
N
0.904
Bo9g024360
Brassica oleracea
Bo9g024360
N
0.974
Bra037283
Brassica rapa
Bra037283
N
0.975
BRADI3G13630
Brachypodium distachyon
BRADI3G13630
N
0.937
anac036
Arabidopsis lyrata
fgenesh2_kg.3__3291__AT2G17040.1
N
0.889
GLYMA11G10230
Glycine max
GLYMA11G10230
N
0.894
GLYMA12G02540
Glycine max
GLYMA12G02540
N
0.894
MTR_4g075980
Medicago truncatula
MTR_4g075980
N
0.891
POPTR_0004s18860
Populus trichocarpa
POPTR_0004s18860
N
0.883
Aquca_015_00469
Aquilegia coerulea
Aquca_015_00469
N
0.885
TCM_006499
Theobroma cacao
TCM_006499
N
0.909
VIT_04s0008g00150
Vitis vinifera
VIT_04s0008g00150
N
0.911
Ca_11128
Cicer arietinum
Ca_11128
N
0.902
Pm020961
Prunus mume
Pm020961
N
0.904
29797.m000353
Ricinus communis
29797.m000353
N
0.896
cassava13355.valid.m1
Manihot esculenta
cassava13355.valid.m1
N
0.880
Cucsa.119310
Cucumis sativus
Cucsa.119310
N
0.995
mgf013168m
Mimulus guttatus
mgf013168m
N
0.874