CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene27240-v1.0-hybrid
(
Fragaria vesca
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gene27240-v1.0-hybrid
T297998_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna27240.1-v1.0-hybrid
NAC/NAM
11
150
LPGQRFCPMEDELLMHYLNPKVNGKEVPGQETLISELDLYGDEEPWNTWKRFEKDRANDLRRNKDLYFFTRLKKVSAKGSRICRKVGKGTWKGQDKAKKIYLVDQKQQQTKTLLGSRKTYTYKNTGSEHHGRWIMYEYEL
Links
Other
NAC/NAM
family TFs
Other
Fragaria vesca
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_42821
Hordeum vulgare
MLOC_42821
I
F775_20402
Aegilops tauschii
F775_20402
N
GLYMA10G44031
Glycine max
GLYMA10G44031
N
PGSC0003DMG402018896
Solanum tuberosum
PGSC0003DMG402018896
N
POPTR_0017s08230
Populus trichocarpa
POPTR_0017s08230
N
SPU_005372
Strongylocentrotus purpuratus
SPU_005372
N
Traes_6BS_165C5AFD9
Triticum aestivum
Traes_6BS_165C5AFD9
N
Traes_6DS_C7F653F0F
Triticum aestivum
Traes_6DS_C7F653F0F
N
Eucgr.F01991
Eucalyptus grandis
Eucgr.F01991
N
PDK_20s1331851g001
Phoenix dactylifera
PDK_20s1331851g001
N
PDK_20s1400562g001
Phoenix dactylifera
PDK_20s1400562g001
N