Thhalv10021011m.g (Eutrema salsugineum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Thhalv10021011m.g T299277_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC047
M07198_2.00 		Arabidopsis thaliana
CACGB
VCGTG		 Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a 		0.953 0.973
NAC047
M07199_2.00 		Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW		 Dap-seq
OMalley et al.(2016)
ANAC047_col 		0.953 0.973
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021011m NAC/NAM 11 140

Links

Other NAC/NAM family TFs
Other Eutrema salsugineum TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G16930 Glycine max GLYMA02G16930 N
GLYMA10G02860 Glycine max GLYMA10G02860 N
MTR_1g089750 Medicago truncatula MTR_1g089750 N
MBD4 Arabidopsis lyrata scaffold_503585.1 N
Ca_08314 Cicer arietinum Ca_08314 N
Pm019897 Prunus mume Pm019897 N
29703.m001533 Ricinus communis 29703.m001533 N
Bostr.13158s0305 Boechera stricta Bostr.13158s0305 N
Cagra.0664s0040 Capsella grandiflora Cagra.0664s0040 N
Carubv10018085m.g Capsella rubella Carubv10018085m.g N
gene27736-v1.0-hybrid Fragaria vesca gene27736-v1.0-hybrid N
Lus10027980.g Linum usitatissimum Lus10027980.g N
MDP0000216740 Malus domestica MDP0000216740 N
MDP0000315483 Malus domestica MDP0000315483 N
MDP0000403994 Malus domestica MDP0000403994 N
LjSGA_013286.1 Lotus japonicus LjSGA_013286.1 N