CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LjSGA_024981.1
(
Lotus japonicus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
LjSGA_024981.1
T299433_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_024981.1
NAC/NAM
7
133
IPGFRFHPTDVELIMYFLKRKILGRKFPFDVIAELDIYKYAPWDLPDKSVLKTGDLKWYFFCPRGMKYSTGGKLNRATEFGYWKTTGKDRSVEHKNQVVGMIRTLVFHIGRAPKGDRTDWVMHEFRI
Links
Other
NAC/NAM
family TFs
Other
Lotus japonicus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g101690
Brassica oleracea
Bo3g101690
I
0.886
Bra024263
Brassica rapa
Bra024263
I
0.886
Thhalv10004501m.g
Eutrema salsugineum
Thhalv10004501m.g
I
0.890
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
0.874
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
0.913
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
0.913
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
0.913
chr4.CM0680.260.nc
Lotus japonicus
chr4.CM0680.260.nc
N
0.883
Bo3g005150
Brassica oleracea
Bo3g005150
N
0.875
orange1.1g036240m.g
Citrus sinensis
orange1.1g036240m.g
N
0.906
gene27615-v1.0-hybrid
Fragaria vesca
gene27615-v1.0-hybrid
N
0.896
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
0.906
mgf025137m
Mimulus guttatus
mgf025137m
N
0.885
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
0.899
cassava43226.valid.m1
Manihot esculenta
cassava43226.valid.m1
N
0.899
30136.m001048
Ricinus communis
30136.m001048
N
0.891
Pm022531
Prunus mume
Pm022531
N
0.898
Ca_04187
Cicer arietinum
Ca_04187
N
0.938
Solyc11g005920.1
Solanum lycopersicum
Solyc11g005920.1
N
0.890
PRUPE_ppa007941mg
Prunus persica
PRUPE_ppa007941mg
N
0.901
PRUPE_ppa006028mg
Prunus persica
PRUPE_ppa006028mg
N
0.889
POPTR_0005s06040
Populus trichocarpa
POPTR_0005s06040
N
0.872
PGSC0003DMG400028662
Solanum tuberosum
PGSC0003DMG400028662
N
0.901
MTR_3g096140
Medicago truncatula
MTR_3g096140
N
0.920
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
0.872
GLYMA04G39140
Glycine max
GLYMA04G39140
N
0.904
Bra009379
Brassica rapa
Bra009379
N
0.873