Cucsa.136670 (Cucumis sativus)
NFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01422 (zf-NF-X1) IPR000967 Cucsa.136670 T300924_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.136670.1 NFX 184 201
Cucsa.136670.1 NFX 236 254
Cucsa.136670.1 NFX 289 307
Cucsa.136670.1 NFX 343 362
Cucsa.136670.1 NFX 396 414
Cucsa.136670.1 NFX 417 441
Cucsa.136670.1 NFX 488 500
Cucsa.136670.1 NFX 509 520
Cucsa.136670.1 NFX 585 602
Cucsa.136670.1 NFX 634 651
Cucsa.136670.1 NFX 697 717

Links

Other NFX family TFs
Other Cucumis sativus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_13412 Cicer arietinum Ca_13412 N 0.778
Thhalv10012642m.g Eutrema salsugineum Thhalv10012642m.g N 0.842
Pavir.J07154 Panicum virgatum Pavir.J07154 N 0.714
Lus10028286.g Linum usitatissimum Lus10028286.g N 0.730
Gorai.010G197800 Gossypium raimondii Gorai.010G197800 N 0.757
evm.TU.supercontig_19.173 Carica papaya evm.TU.supercontig_19.173 N 0.757
Eucgr.J00206 Eucalyptus grandis Eucgr.J00206 N 0.762
Carubv10003051m.g Capsella rubella Carubv10003051m.g N 0.843
Cagra.1504s0067 Capsella grandiflora Cagra.1504s0067 N 0.843
Aquca_045_00093 Aquilegia coerulea Aquca_045_00093 N 0.865
mgf001689m Mimulus guttatus mgf001689m N 0.800
cassava20878.m1 Manihot esculenta cassava20878.m1 N 0.828
Pm018929 Prunus mume Pm018929 N 0.849
NFXL2 Arabidopsis thaliana AT5G05660 N 0.837
ATNFXL2 Vitis vinifera VIT_13s0067g00920 N 0.778
Traes_3AS_496047B73 Triticum aestivum Traes_3AS_496047B73 N 0.768
TCM_042496 Theobroma cacao TCM_042496 N 0.741
Solyc06g051570.2 Solanum lycopersicum Solyc06g051570.2 N 0.735
SELMODRAFT_510 Selaginella moellendorffii SELMODRAFT_510 N 0.757
Sb03g005310 Sorghum bicolor Sb03g005310 N 0.703
PRUPE_ppa001277mg Prunus persica PRUPE_ppa001277mg N 0.840
MLOC_4879 Hordeum vulgare MLOC_4879 N 0.762
GRMZM2G139369 Zea mays GRMZM2G139369 N 0.714
GLYMA18G03080 Glycine max GLYMA18G03080 N 0.708
NFXL1 Oryctolagus cuniculus ENSOCUG00000008876 N 0.703
ENSOARG00000016535 Ovis aries ENSOARG00000016535 N 0.708