kni (Drosophila simulans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 FBgn0044187 T305288_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.989 1.000
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.989 1.000
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.989 1.000
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.989 1.000
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.989 1.000
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.989 1.000
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.989 1.000
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.983 0.871
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.981 0.857
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.981 0.857
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.981 0.857
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.958 0.800
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.958 0.800
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0210574 Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Drosophila simulans TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava19450.valid.m1 Manihot esculenta cassava19450.valid.m1 N 0.000
Thhalv10016312m.g Eutrema salsugineum Thhalv10016312m.g N 0.000
Thhalv10006868m.g Eutrema salsugineum Thhalv10006868m.g N 0.000
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.000
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.000
SapurV1A.0040s0470 Salix purpurea SapurV1A.0040s0470 N 0.000
evm.TU.supercontig_81.126 Carica papaya evm.TU.supercontig_81.126 N 0.000
evm.TU.supercontig_81.124 Carica papaya evm.TU.supercontig_81.124 N 0.000
Carubv10024938m.g Capsella rubella Carubv10024938m.g N 0.000
Carubv10008391m.g Capsella rubella Carubv10008391m.g N 0.000
Cagra.3264s0006 Capsella grandiflora Cagra.3264s0006 N 0.000
Cagra.1671s0373 Capsella grandiflora Cagra.1671s0373 N 0.000
Bostr.27991s0167 Boechera stricta Bostr.27991s0167 N 0.000
Bostr.25219s0207 Boechera stricta Bostr.25219s0207 N 0.000
SCL14 Arabidopsis thaliana AT1G07530 N 0.000
28650.m000191 Ricinus communis 28650.m000191 N 0.000
Pm000719 Prunus mume Pm000719 N 0.000
Ca_16678 Cicer arietinum Ca_16678 N 0.000
PRUPE_ppa003149mg Prunus persica PRUPE_ppa003149mg N 0.000
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.000
POPTR_0001s24850 Populus trichocarpa POPTR_0001s24850 N 0.000
Bra035653 Brassica rapa Bra035653 N 0.000
Bra030688 Brassica rapa Bra030688 N 0.000
Bra028390 Brassica rapa Bra028390 N 0.000
Bo4g168030 Brassica oleracea Bo4g168030 N 0.000
Bo4g065860 Brassica oleracea Bo4g065860 N 0.000
Bo01118s010 Brassica oleracea Bo01118s010 N 0.000
SCL33 Arabidopsis thaliana AT2G29060 N 0.000