CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0001920701
(
Ascaris lumbricoides
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ALUE_0001920701
T307957_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0001920701-mRNA-1
Nuclear receptor
1
67
MVCAGRASGHHYDVASCNGCKAFFRRSYISGKRYKCKMSSKCTITEGKRTLCRACRYNKCVEVGMRP
Links
Other
Nuclear receptor
family TFs
Other
Ascaris lumbricoides
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG10857
Caenorhabditis briggsae
CBG10857
I
0.750
SMUV_0001072301
Syphacia muris
SMUV_0001072301
I
0.892
scaffold572-EXSNAP2012.7
Pristionchus exspectatus
scaffold572-EXSNAP2012.7
I
0.836
scaffold384-EXSNAP2012.4
Pristionchus exspectatus
scaffold384-EXSNAP2012.4
I
0.836
NECAME_01944
Necator americanus
NECAME_01944
I
0.764
L893_g3565
Steinernema glaseri
L893_g3565
I
0.808
L893_g28857
Steinernema glaseri
L893_g28857
I
0.745
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.804
L892_g17612
Steinernema scapterisci
L892_g17612
I
0.810
L889_g1891
Steinernema feltiae
L889_g1891
I
0.788
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.766
HPBE_0001246601
Heligmosomoides bakeri
HPBE_0001246601
I
0.772
HCOI01525900
Haemonchus contortus
HCOI01525900
I
0.772
ASU_02755
Ascaris suum
ASU_02755
I
0.912
ASIM_0001569801
Anisakis simplex
ASIM_0001569801
I
0.773
ANCCAN_09880
Ancylostoma caninum
ANCCAN_09880
I
0.771
nhr-173
Caenorhabditis elegans
WBGene00016975
I
0.750
nhr-136
Caenorhabditis elegans
WBGene00003726
I
0.773
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.819
Ppa-nhr-120
Pristionchus pacificus
PPA00183
I
0.836
CRE00606
Caenorhabditis remanei
CRE00606
I
0.750
CRE00149
Caenorhabditis remanei
CRE00149
I
0.819
CJA08896
Caenorhabditis japonica
CJA08896
I
0.819
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.821
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.819
TCNE_0001076801
Toxocara canis
TCNE_0001076801
N
0.862