PEQ_0000560101 (Parascaris equorum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 PEQ_0000560101 T309970_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.886 0.565
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.817 0.581
nhr-84
M02414_2.00 		Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN		 PBM
Weirauch et al.(2014)
pTH5828 		0.814 0.548
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.795 0.516
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.795 0.516
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0000560101-mRNA-1 Nuclear receptor 2 64

Links

Other Nuclear receptor family TFs
Other Parascaris equorum TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA10G42450 Glycine max GLYMA10G42450 I
GLYMA20G24600 Glycine max GLYMA20G24600 I
MTR_1g111830 Medicago truncatula MTR_1g111830 I
Ca_05454 Cicer arietinum Ca_05454 I
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I
SELMODRAFT_47760 Selaginella moellendorffii SELMODRAFT_47760 N
TCM_041362 Theobroma cacao TCM_041362 N
Cla014242 Citrullus lanatus Cla014242 N
Cucsa.103200 Cucumis sativus Cucsa.103200 N
Gorai.006G113100 Gossypium raimondii Gorai.006G113100 N