CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0000845101
(
Angiostrongylus costaricensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
ACOC_0000845101
T312474_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0000845101-mRNA-1
Paired box
27
98
KLTSSDVQEQIVKLAKKGLRPSQIGVILRDSHGVAQVRRVTGNKIFRILKAKGMAPEIPEDLYHLIKKAVSI
Links
Other
Paired box
family TFs
Other
Angiostrongylus costaricensis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPL10
Arabidopsis thaliana
AT1G27370
D
SPL11
Arabidopsis thaliana
AT1G27360
D
Ca_08506
Cicer arietinum
Ca_08506
I
Thhalv10007882m.g
Eutrema salsugineum
Thhalv10007882m.g
I
29929.m004641
Ricinus communis
29929.m004641
I
Aquca_018_00218
Aquilegia coerulea
Aquca_018_00218
I
Bostr.15697s0062
Boechera stricta
Bostr.15697s0062
I
Bostr.15697s0063
Boechera stricta
Bostr.15697s0063
I
Cagra.8874s0007
Capsella grandiflora
Cagra.8874s0007
I
Cagra.8874s0008
Capsella grandiflora
Cagra.8874s0008
I
Carubv10009364m.g
Capsella rubella
Carubv10009364m.g
I
Carubv10009367m.g
Capsella rubella
Carubv10009367m.g
I
Eucgr.B03500
Eucalyptus grandis
Eucgr.B03500
I
evm.TU.supercontig_43.66
Carica papaya
evm.TU.supercontig_43.66
I
Lus10006411.g
Linum usitatissimum
Lus10006411.g
I
Lus10011356.g
Linum usitatissimum
Lus10011356.g
I
SapurV1A.0056s0240
Salix purpurea
SapurV1A.0056s0240
I
SapurV1A.1271s0060
Salix purpurea
SapurV1A.1271s0060
I
Thhalv10007832m.g
Eutrema salsugineum
Thhalv10007832m.g
I
Bra032823
Brassica rapa
Bra032823
I
Bo3g141480
Brassica oleracea
Bo3g141480
I
Bo5g051970
Brassica oleracea
Bo5g051970
I
Bo5g051980
Brassica oleracea
Bo5g051980
I
Bo7g049940
Brassica oleracea
Bo7g049940
I
Bo7g049950
Brassica oleracea
Bo7g049950
I
Bra010949
Brassica rapa
Bra010949
I
Bra030040
Brassica rapa
Bra030040
I
Bra032822
Brassica rapa
Bra032822
I
VIT_01s0010g03710
Vitis vinifera
VIT_01s0010g03710
I
BRADI3G05510
Brachypodium distachyon
BRADI3G05510
I
SPL10
Arabidopsis lyrata
fgenesh2_kg.1__2893__AT1G27370.2
I
GSMUA_Achr4G12470_001
Musa acuminata
GSMUA_Achr4G12470_001
I
PGSC0003DMG400026736
Solanum tuberosum
PGSC0003DMG400026736
I
POPTR_0001s13890
Populus trichocarpa
POPTR_0001s13890
I
POPTR_0003s17120
Populus trichocarpa
POPTR_0003s17120
I
SPL11
Arabidopsis lyrata
scaffold_103051.1
I
cassava12059.valid.m1
Manihot esculenta
cassava12059.valid.m1
N