NFATC1 (Cavia porcellus)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSCPOG00000003999 T317076_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.986 0.986
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.965 0.965
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.958 0.958
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.958 0.958
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.958 0.958
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.958 0.958
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.958 0.958
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.958 0.958
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.958 0.958
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.958 0.958
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.958 0.958
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.958 0.958
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.958 0.958
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.958 0.958
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.958 0.958
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.958 0.958
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.958 0.958
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.951 0.951
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.937 0.937
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.846 0.846
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.846 0.846
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.846 0.846
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.846 0.846
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.846 0.846
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.846 0.846
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.846 0.846
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.846 0.846
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.846 0.846
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.846 0.846
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.846 0.846
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.846 0.846
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.832 0.832
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.832 0.832
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.832 0.832
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.832 0.832
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.832 0.832
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.832 0.832
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.832 0.832
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.832 0.832
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.832 0.832
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.832 0.832
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.811 0.811
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.811 0.811
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.811 0.811
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.811 0.811
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.811 0.811
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.811 0.811
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.811 0.811
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.811 0.811
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.811 0.811
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000003609 Rel 429 589

Links

Other Rel family TFs
Other Cavia porcellus TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK06103.1 Cannabis sativa PK06103.1 D 0.000
Pm021139 Prunus mume Pm021139 I 0.000
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I 0.000
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.000
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I 0.000
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.000
Aquca_060_00026 Aquilegia coerulea Aquca_060_00026 I 0.000
EuGene.1300010252 Ostreococcus RCC809 EuGene.1300010252 I 0.000
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I 0.000
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.000
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.000
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.000
29812.m000204 Ricinus communis 29812.m000204 I 0.000
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I 0.000
Pm002374 Prunus mume Pm002374 I 0.000
Cla014248 Citrullus lanatus Cla014248 I 0.000
Cla006547 Citrullus lanatus Cla006547 I 0.000
Ca_09355 Cicer arietinum Ca_09355 I 0.000
Ca_02722 Cicer arietinum Ca_02722 I 0.000
Ca_02232 Cicer arietinum Ca_02232 I 0.000
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.000
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.000
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.000
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.000
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.000
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.000
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.000
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.000
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.000
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.000
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.000
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.000
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.000
PK19870.1 Cannabis sativa PK19870.1 I 0.000
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.000
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.000
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I 0.000
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.000
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.000
MDP0000239354 Malus domestica MDP0000239354 I 0.000
MDP0000234807 Malus domestica MDP0000234807 I 0.000
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.000
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.000
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.000
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.000
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.000
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.000
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.000
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I 0.000
OBART12G18680 Oryza barthii OBART12G18680 I 0.000
OB12G25520 Oryza brachyantha OB12G25520 I 0.000
MTR_5g015340 Medicago truncatula MTR_5g015340 I 0.000
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.000
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.000
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.000
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.000
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.000
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.000
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.000
OLONG_008332 Oryza longistaminata OLONG_008332 I 0.000
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.000
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.000
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.000
GRMZM2G023667 Zea mays GRMZM2G023667 I 0.000
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.000
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.000
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.000
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.000
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.000
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.000
BGIOSGA035841 Oryza indica BGIOSGA035841 I 0.000
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.000
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.000
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.000
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.000
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.000
TCM_007242 Theobroma cacao TCM_007242 I 0.000
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I 0.000
Si002467m.g Setaria italica Si002467m.g I 0.000
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.000
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.000
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I 0.000
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I 0.000
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I 0.000
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.000
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.000
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.000
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.000
OS12G0613300 Oryza sativa OS12G0613300 I 0.000
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I 0.000
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I 0.000
OPUNC12G16890 Oryza punctata OPUNC12G16890 I 0.000
ONIVA12G17630 Oryza nivara ONIVA12G17630 I 0.000
OMERI12G14000 Oryza meridionalis OMERI12G14000 I 0.000