GD17495 (Drosophila simulans)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0189047 T319555_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.746 0.746
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.746 0.746
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.746 0.746
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.746 0.746
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.731 0.731
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.723 0.723
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.723 0.723
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.723 0.723
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.723 0.723
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.723 0.723
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.723 0.723
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.723 0.723
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.723 0.723
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.723 0.723
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.723 0.723
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.723 0.723
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.723 0.723
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.708 0.708
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.708 0.708
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.708 0.708
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.708 0.708
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.708 0.708
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.708 0.708
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.708 0.708
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.708 0.708
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.708 0.708
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.708 0.708
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.708 0.708
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.708 0.708
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.708 0.708
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.708 0.708
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.708 0.708
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.708 0.708
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.708 0.708
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.708 0.708
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.708 0.708
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.708 0.708
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.708 0.708
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.708 0.708
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.708 0.708
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0215897 Runt 110 239

Links

Other Runt family TFs
Other Drosophila simulans TFs

353 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RUNX2 Homo sapiens ENSG00000124813 D 0.708
Runx1 Mus musculus ENSMUSG00000022952 D 0.726
Runx2 Mus musculus ENSMUSG00000039153 D 0.708
lz Drosophila melanogaster FBgn0002576 D 0.746
run Drosophila melanogaster FBgn0003300 D 0.731
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I
CpipJ_CPIJ016825 Culex pipiens CpipJ_CPIJ016825 I 0.711
AAEL006160 Aedes aegypti AAEL006160 I 0.808
ACEP16394 Atta cephalotes ACEP16394 I
ACEP16400 Atta cephalotes ACEP16400 I 0.786
ACEP16406 Atta cephalotes ACEP16406 I
ACEP16410 Atta cephalotes ACEP16410 I 0.738
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.846
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.815
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.746
CPIJ006373 Culex quinquefasciatus CPIJ006373 I
CPIJ016825 Culex quinquefasciatus CPIJ016825 I 0.711
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.708
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.715
ENSAMXG00000012244 Astyanax mexicanus ENSAMXG00000012244 I 0.700
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.700
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.711
RUNX2 Bos taurus ENSBTAG00000004104 I 0.708
RUNX3 Bos taurus ENSBTAG00000019800 I
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I 0.773
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.708
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.708
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.708
runx2a Danio rerio ENSDARG00000040261 I 0.700
runx2b Danio rerio ENSDARG00000059233 I 0.718
CABZ01102124.1 Danio rerio ENSDARG00000103592 I 0.711
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.723
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.708
RUNX1 Equus caballus ENSECAG00000003462 I 0.723
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.708
ENSFALG00000001493 Ficedula albicollis ENSFALG00000001493 I
runx2b Gasterosteus aculeatus ENSGACG00000012322 I
RUNX1 Gasterosteus aculeatus ENSGACG00000015276 I
ENSGALG00000026484 Gallus gallus ENSGALG00000026484 I
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.708
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.708
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.708
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.723
RUNX2 Loxodonta africana ENSLAFG00000005054 I 0.767
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.700
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.708
ENSMGAG00000014534 Meleagris gallopavo ENSMGAG00000014534 I 0.744
RUNX3 Myotis lucifugus ENSMLUG00000003395 I
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.708
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.708
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.715
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.723
ENSMPUG00000015804 Mustela putorius furo ENSMPUG00000015804 I
ENSOARG00000013599 Ovis aries ENSOARG00000013599 I
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.708
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.721
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.708
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.708
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.700
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.708
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.708
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.715
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.708
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.708
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.715
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.708
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.708
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.700
ENSTNIG00000018690 Tetraodon nigroviridis ENSTNIG00000018690 I
runx2 Takifugu rubripes ENSTRUG00000003501 I
runx1 Takifugu rubripes ENSTRUG00000012611 I
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.723
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.708
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.723
run Drosophila pseudoobscura FBgn0013862 I 0.731
run Drosophila virilis FBgn0013920 I 0.731
run Drosophila simulans FBgn0016352 I 0.731
GA13742 Drosophila pseudoobscura FBgn0073778 I 1.000
run Drosophila yakuba FBgn0084618 I 0.731
run Drosophila erecta FBgn0085118 I 0.731
GF15967 Drosophila ananassae FBgn0092990 I 1.000
GF15970 Drosophila ananassae FBgn0092993 I 0.731
GG18309 Drosophila erecta FBgn0110525 I 0.746
GG19691 Drosophila erecta FBgn0111893 I 1.000
GH17737 Drosophila grimshawi FBgn0125207 I 1.000
GH17740 Drosophila grimshawi FBgn0125210 I 0.731
GI15491 Drosophila mojavensis FBgn0138240 I 0.731
GL15800 Drosophila persimilis FBgn0153404 I 1.000
GL15806 Drosophila persimilis FBgn0153410 I 0.731
GL16499 Drosophila persimilis FBgn0154103 I 0.762
GM22478 Drosophila sechellia FBgn0177348 I 0.746
GM23044 Drosophila sechellia FBgn0177912 I 1.000
GM23050 Drosophila sechellia FBgn0177918 I 0.731
GJ19245 Drosophila virilis FBgn0206390 I 1.000
GK19810 Drosophila willistoni FBgn0221808 I 1.000
GK19815 Drosophila willistoni FBgn0221813 I 0.731
GE17788 Drosophila yakuba FBgn0235232 I 0.746
GE17890 Drosophila yakuba FBgn0235328 I 1.000
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.762
RunxB Drosophila melanogaster FBgn0259162 I 1.000
HMEL009842 Heliconius melpomene HMEL009842 I 0.769
HMEL014739 Heliconius melpomene HMEL014739 I 0.733
KGM_21065 Danaus plexippus KGM_21065 I 0.733
KGM_21067 Danaus plexippus KGM_21067 I 0.731
MCINX000302 Melitaea cinxia MCINX000302 I 0.823
MESCA007078 Megaselia scalaris MESCA007078 I 0.757
RPRC005391 Rhodnius prolixus RPRC005391 I 0.800
SINV13317 Solenopsis invicta SINV13317 I 0.785
TC006536 Tribolium castaneum TC006536 I 0.846
TC006542 Tribolium castaneum TC006542 I 0.777
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.785
Afo_R012718 Aptenodytes forsteri Afo_R012718 I
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.785
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.708
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.708
Gfo_R000714 Geospiza fortis Gfo_R000714 I 0.703
Gfo_R013848 Geospiza fortis Gfo_R013848 I 0.711
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.815
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.785
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.708
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.769
CLEC011124 Cimex lectularius CLEC011124 I
LCUP002656 Lucilia cuprina LCUP002656 I 0.786
runx2.L Xenopus laevis XB-GENE-864817 I
runx1.L Xenopus laevis XB-GENE-864949 I 0.715
XP_002939386 Xenopus tropicalis XP_002939386 I 0.715
XP_002939387 Xenopus tropicalis XP_002939387 I 0.715
AALB007752 Anopheles albimanus AALB007752 I 0.775
AATE002063 Anopheles atroparvus AATE002063 I 0.808
AFAF013225 Anopheles farauti AFAF013225 I
AMAM011616 Anopheles maculatus AMAM011616 I 0.760
AQUA009446 Anopheles quadriannulatus AQUA009446 I 0.760
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.808
BGLB004758 Biomphalaria glabrata BGLB004758 I 0.746
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.797
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.958
PPAI007797 Phlebotomus papatasi PPAI007797 I