OGLUM05G29230 (Oryza glumaepatula)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OGLUM05G29230 T323896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G29230.1 Sigma 70 249 315

Links

Other Sigma 70 family TFs
Other Oryza glumaepatula TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PATZ1 Homo sapiens ENSG00000100105 D
Patz1 Mus musculus ENSMUSG00000020453 I
ENSAPLG00000003934 Anas platyrhynchos ENSAPLG00000003934 I
ENSNLEG00000004385 Nomascus leucogenys ENSNLEG00000004385 I
PATZ1 Ornithorhynchus anatinus ENSOANG00000014654 I
PATZ1 Otolemur garnettii ENSOGAG00000027905 I
ENSPPYG00000011732 Pongo abelii ENSPPYG00000011732 I
ENSPSIG00000011562 Pelodiscus sinensis ENSPSIG00000011562 I
ENSPSIG00000016553 Pelodiscus sinensis ENSPSIG00000016553 I
PATZ1 Pan troglodytes ENSPTRG00000014268 I
PATZ1 Pteropus vampyrus ENSPVAG00000001749 I
ENSSTOG00000020707 Ictidomys tridecemlineatus ENSSTOG00000020707 I
PATZ1 Tursiops truncatus ENSTTRG00000010279 I
Aan_R008287 Calypte anna Aan_R008287 I
Afo_R009044 Aptenodytes forsteri Afo_R009044 I
Brh_R010628 Buceros rhinoceros Brh_R010628 I
ENSP00000266269-D1 Bos grunniens ENSP00000266269-D1 I
ENSP00000266269 Macaca fascicularis ENSP00000266269 I
Gfo_R010882 Geospiza fortis Gfo_R010882 I
Myotis_brandtii_PATZ1_10027570 Myotis brandtii Myotis_brandtii_PATZ1_10027570 I
Pvit_03702 Pogona vitticeps Pvit_03702 I
Tal_R008892 Tyto alba Tal_R008892 I
PATZ1 Gallus gallus ENSGALG00000006934 I
ENSAMEG00000007074 Ailuropoda melanoleuca ENSAMEG00000007074 I
PATZ1 Bos taurus ENSBTAG00000005478 I
PATZ1 Canis familiaris ENSCAFG00000013087 I
PATZ1 Cavia porcellus ENSCPOG00000010787 I
PATZ1 Dasypus novemcinctus ENSDNOG00000003183 I
ENSFALG00000007450 Ficedula albicollis ENSFALG00000007450 I
PATZ1 Gorilla gorilla ENSGGOG00000017171 I
ENSLACG00000016839 Latimeria chalumnae ENSLACG00000016839 I
ENSMEUG00000016293 Macropus eugenii ENSMEUG00000016293 I
PATZ1 Macaca mulatta ENSMMUG00000013911 I
PATZ1 Myotis lucifugus ENSMLUG00000009942 I
PATZ1 Microcebus murinus ENSMICG00000005430 I
PATZ1 Meleagris gallopavo ENSMGAG00000008439 I
PATZ1 Loxodonta africana ENSLAFG00000002317 I
PATZ1 Sus scrofa ENSSSCG00000010027 N
ENSMPUG00000012814 Mustela putorius furo ENSMPUG00000012814 N
PATZ1 Taeniopygia guttata ENSTGUG00000009749 N
PATZ1 Felis catus ENSFCAG00000030253 N
PATZ1 Ochotona princeps ENSOPRG00000002286 N
PATZ1 Equus caballus ENSECAG00000025030 N
Alligator_sinensis_CCG014139.1 Alligator sinensis Alligator_sinensis_CCG014139.1 N
Patz1 Rattus norvegicus ENSRNOG00000018709 N
Cmyd_10005165 Chelonia mydas Cmyd_10005165 N
ENSCSAG00000008746 Chlorocebus sabaeus ENSCSAG00000008746 N
PATZ1 Oryctolagus cuniculus ENSOCUG00000002323 N
PATZ1 Callithrix jacchus ENSCJAG00000010978 N
ENSOARG00000010061 Ovis aries ENSOARG00000010061 N
Ogr03452 Ophisaurus gracilis Ogr03452 N