Tal_R011237 (Tyto alba)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 Tal_R011237 T325351_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad3
M00192_2.00 		Mus musculus
NNNNNMGMCN
NGKCKNNNNN		 PBM
Badis et al.(2009)
Smad3_3805 		0.947 0.947
SMAD3
M03482_2.00 		Homo sapiens
YGTCTAGACA
TGTCTAGACR		 SELEX
Jolma et al.(2013)
SMAD3_1 		0.947 0.947
SMAD3
M09380_2.00 		Homo sapiens
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_HUMAN.H11MO.0.B 		0.947 0.947
Smad3
M09384_2.00 		Mus musculus
NBCTSHCWSCWB
VWGSWGDSAGVN		 Misc
Kulakovskiy et al.(2013)
SMAD3_MOUSE.H11MO.0.B 		0.947 0.947
Smad3
M09637_2.00 		Mus musculus
BYAGMCWN
NWGKCTRV		 Misc
Heinz et al.(2010)
NPC-Smad3_GSE36673 		0.947 0.947
SMAD3
M11283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_01 		0.947 0.947
SMAD3
M11284_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6_02 		0.947 0.947
SMAD3
M11285_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD3_Q6 		0.947 0.947
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R011237 SMAD 36 73

Links

Other SMAD family TFs
Other Tyto alba TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAD3 Homo sapiens ENSG00000166949 D 0.947
Smad3 Mus musculus ENSMUSG00000032402 D 0.947
CpipJ_CPIJ018354 Culex pipiens CpipJ_CPIJ018354 I 0.895
ACEP23524 Atta cephalotes ACEP23524 I 0.842
Aqu1.222022 Amphimedon queenslandica Aqu1.222022 I 0.763
CapteG167863 Capitella teleta CapteG167863 I 0.763
CGI_10017370 Crassostrea gigas CGI_10017370 I 0.789
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I 0.763
EFV60166 Trichinella spiralis EFV60166 I 0.737
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I 0.947
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I 0.947
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I 1.000
SMAD3 Canis familiaris ENSCAFG00000017388 I 0.947
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I 0.921
SMAD3 Callithrix jacchus ENSCJAG00000002088 I 0.947
SMAD3 Cavia porcellus ENSCPOG00000021314 I 0.921
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I 0.947
smad3b Danio rerio ENSDARG00000010207 I 0.921
smad3a Danio rerio ENSDARG00000036096 I 0.921
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I 0.947
SMAD3 Echinops telfairi ENSETEG00000003356 I 0.921
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I 0.947
smad3b Gasterosteus aculeatus ENSGACG00000005092 I 0.921
SMAD3 Gasterosteus aculeatus ENSGACG00000016882 I 0.947
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I 0.947
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I 0.947
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I 1.000
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I 0.947
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I 0.895
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I 0.921
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 1.000
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I 0.947
SMAD3 Microcebus murinus ENSMICG00000006119 I 0.947
SMAD2 Microcebus murinus ENSMICG00000007882 I 0.974
SMAD3 Macaca mulatta ENSMMUG00000015455 I 0.947
SMAD3 Monodelphis domestica ENSMODG00000009609 I 0.947
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I 0.947
ENSOARG00000018267 Ovis aries ENSOARG00000018267 I 0.947
SMAD3 Otolemur garnettii ENSOGAG00000014217 I 0.947
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I 0.947
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I 0.947
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I 0.921
SMAD3 Ochotona princeps ENSOPRG00000014996 I 0.947
smad3a Oryzias latipes ENSORLG00000002207 I 0.921
smad3b Oryzias latipes ENSORLG00000006803 I 0.895
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I 0.921
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I 0.947
SMAD3 Procavia capensis ENSPCAG00000008103 I 0.895
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I 0.974
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I 0.947
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I 0.895
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I 0.789
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I 0.947
SMAD3 Pan troglodytes ENSPTRG00000007199 I 0.947
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I 0.947
Smad3 Rattus norvegicus ENSRNOG00000008620 I 0.947
SMAD2 Sorex araneus ENSSARG00000003487 I 0.974
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I 0.974
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I 0.947
ENSTBEG00000003884 Tupaia belangeri ENSTBEG00000003884 I 0.842
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I 0.947
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I 0.895
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I 0.947
smad3b Takifugu rubripes ENSTRUG00000014802 I 0.868
smad3a Takifugu rubripes ENSTRUG00000016858 I 0.947
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I 0.921
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I 0.895
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I 0.974
HelroG185435 Helobdella robusta HelroG185435 I 0.737
ISCW001846 Ixodes scapularis ISCW001846 I 0.737
L798_14024 Zootermopsis nevadensis L798_14024 I 0.842
LotgiG189014 Lottia gigantea LotgiG189014 I 0.737
MCINX009972 Melitaea cinxia MCINX009972 I 0.711
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I 0.789
NV10880 Nasonia vitripennis NV10880 I 0.842
PHUM033930 Pediculus humanus PHUM033930 I 0.868
SINV22770 Solenopsis invicta SINV22770 I 0.816
SMAR008230 Strigamia maritima SMAR008230 I 0.895
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I 0.789
Aan_R002236 Calypte anna Aan_R002236 I 1.000
Aan_R005610 Calypte anna Aan_R005610 I 0.947
Afo_R015053 Aptenodytes forsteri Afo_R015053 I 0.947
Brh_R001114 Buceros rhinoceros Brh_R001114 I 0.947
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I 0.974
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I 0.947
ENSP00000332973 Macaca fascicularis ENSP00000332973 I 0.947
Gfo_R005908 Geospiza fortis Gfo_R005908 I 0.947
Gfo_R012055 Geospiza fortis Gfo_R012055 I 0.974
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I 0.947
Ogr07750 Ophisaurus gracilis Ogr07750 I 0.868
Tal_R000062 Tyto alba Tal_R000062 I 0.921
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I 0.789
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I 0.789
Sakowv30032220m.g Saccoglossus kowalevskii Sakowv30032220m.g I 0.737
AAB39329 Xenopus laevis AAB39329 I 1.000
CLEC004107 Cimex lectularius CLEC004107 I 0.737
LDEC015977 Leptinotarsa decemlineata LDEC015977 I 0.763
smad3 Xenopus tropicalis XB-GENE-481992 I 0.842
smad3.L Xenopus laevis XB-GENE-864816 I 0.842
smad2.S Xenopus laevis XB-GENE-864923 I 1.000
PPAI005080 Phlebotomus papatasi PPAI005080 I 0.763
D917_04509 Trichinella nativa D917_04509 I 0.737
D918_09504 Trichuris suis D918_09504 I 0.763
TMUE_s0005013500 Trichuris muris TMUE_s0005013500 I 0.763
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I 0.763
BGIBMGA009650 Bombyx mori BGIBMGA009650 N 0.763
Bm3140 Brugia malayi Bm3140 N 0.711
ENSAMXG00000006181 Astyanax mexicanus ENSAMXG00000006181 N 0.921
SMAD2 Ochotona princeps ENSOPRG00000014054 N 0.711
Smox Drosophila melanogaster FBgn0025800 N 0.711
GA15332 Drosophila pseudoobscura FBgn0075352 N 0.711
GF20979 Drosophila ananassae FBgn0097984 N 0.711
GG17985 Drosophila erecta FBgn0110203 N 0.711
GH24864 Drosophila grimshawi FBgn0132319 N 0.737
GL20193 Drosophila persimilis FBgn0157788 N 0.711
GM11208 Drosophila sechellia FBgn0166153 N 0.711
GD24642 Drosophila simulans FBgn0195970 N 0.711
GK24988 Drosophila willistoni FBgn0226947 N 0.711
GE17479 Drosophila yakuba FBgn0234944 N 0.711
GB42212 Apis mellifera GB42212 N 0.842
HMEL009327 Heliconius melpomene HMEL009327 N 0.711
KGM_07498 Danaus plexippus KGM_07498 N 0.711
LOAG_07479 Loa loa LOAG_07479 N 0.711
RPRC003748 Rhodnius prolixus RPRC003748 N 0.711
WBGene00238556 Onchocerca volvulus WBGene00238556 N 0.711
YQE_05290 Dendroctonus ponderosae YQE_05290 N 0.763
Cflo_04487--XP_396056.3_APIME Camponotus floridanus Cflo_04487--XP_396056.3_APIME N 0.816
HHAL008503-PA Halyomorpha halys HHAL008503-PA N 0.711
BTMF_0000153801 Brugia timori BTMF_0000153801 N 0.711
EEL_0000740001 Elaeophora elaphi EEL_0000740001 N 0.711
nDi.2.2.2.g03838 Dirofilaria immitis nDi.2.2.2.g03838 N 0.711
nOo.2.0.1.g09375 Onchocerca ochengi nOo.2.0.1.g09375 N 0.711
OFLC_0000751101 Onchocerca flexuosa OFLC_0000751101 N 0.711